Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1489 TTGCAGGATGCAGTGACAGCATTTTCAACCTGTGGAGATACCATTATCTGTTCCCAAAATGTCACTCCCATGAATTCAACCATCTCTGCTACTATTGATTCTCAAGCATCAAATTGTGGCACTGTTGGAAGCCCAGTTTCAGCTAATAAACCAAACAGCAGTGAGAATCAAACCAAAGGAGCAACAAGTGGTTCATCTGAGCAGTGTGATGAAGATGATGAATATGGTCCTTGTGAACAAAGCACTAATCCTCTTGATGTGAAGCGCCATAGAAGGAAGGTTTCTAATCGAGAGTCTGCAAGGAGATCAAGAAGAAGAAAACAAGCTGAGTTGGGTGACCTTGAGTTGCAGGTTGACAAAATGAAACTGGAAAATGCAACCCTATACAAGCAGTTTACGCATGCAAGTCAACAATTCCGTGATGCTGATACAAATAACCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCACTAGGAGCAGTTTCACCTTAAACAACCAATTTCTTCAGACTCAAATGAGCACACTACCACAACTCAGCACGACTAATCTGCGCGGCATAGCACACGTCTCGCCGACCATCACTGTCCATGGAAATGATGCTTCATATGGTGGTGTCACAATTGGTGGACAGAACTCAACTCATGGGCTTGGAAACTTGGATATACCTTACAACAATGTCAACAATGGAGTTTTTAGTGATGCTGCTAGTTCTGTGACTATGTGGCAGTAA 762 0.4278 LQDAVTAFSTCGDTIICSQNVTPMNSTISATIDSQASNCGTVGSPVSANKPNSSENQTKGATSGSSEQCDEDDEYGPCEQSTNPLDVKRHRRKVSNRESARRSRRRKQAELGDLELQVDKMKLENATLYKQFTHASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTLNNQFLQTQMSTLPQLSTTNLRGIAHVSPTITVHGNDASYGGVTIGGQNSTHGLGNLDIPYNNVNNGVFSDAASSVTMWQ* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1489 253 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Lan3g1489 253 PANTHER BZIP TRANSCRIPTION FACTOR 3 252 - -
Lan3g1489 253 Coils Coil 146 166 - -
Lan3g1489 253 SUPERFAMILY Leucine zipper domain 88 138 IPR046347 GO:0003700|GO:0006355
Lan3g1489 253 Coils Coil 97 131 - -
Lan3g1489 253 MobiDBLite consensus disorder prediction 42 108 - -
Lan3g1489 253 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Lan3g1489 253 MobiDBLite consensus disorder prediction 42 65 - -
Lan3g1489 253 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Lan3g1489 253 PANTHER BASIC LEUCINE ZIPPER 63 3 252 - -
Lan3g1489 253 Pfam bZIP transcription factor 87 132 IPR004827 GO:0003700|GO:0006355
Lan3g1489 253 Gene3D - 87 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1489 Lan-Chr3 26383245 26385196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1489 13 230 bZIP Transcription Factor Family AT5G24800 49.107 6.51e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan3g1489 bZIP_1 4.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1489 K25784 - gmx:780555 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1489 3 26383245 26385196 Lan3g1489 3 26383245 26385196 ECH
Lan15g0971 15 18971033 18973788 Lan3g1489 3 26383245 26385196 LSH