Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1488 ATGGAACCTGCACCGCAATCTCTGATAACGCCGCCAACGGTTTTTCCCGGTTTCTTCAAACGGATGGGGGAATTTGATCTCTACGATGATCACTGGTATAACGACTTTGACCACGTGAAACCTGATTACTTTCGGTTCGGCACCGATGCATTGATCGGCGACGTTTTCTCCGATGACCTCACTCCCGCCGCCGCCACCCATAACAATACGGATGCAGTGACAGCATTTTCAACCTGTGGAGATACCATTATCTGTTCCCAAAATGTCACTCCCATGAATTCAACCATCTCTGCTACTATTGATTCTCAAGCATCAAATTGTGGCACTGTTGGAAGCCCAGTTTCAGCTAATAAACCAAACAGCAGTGAGAATCAAACCAAAGGAGCAACAAGTGGTTCATCTGAGCAGTGTGATGAAGATGATGAATATGGTCCTTGTGAACAAAGCACTAATCCTCTTGATGTGAAGCGCCATAGAAGGAAGGTTTCTAATCGAGAGTCTGCAAGGAGATCAAGAAGAAGAAAACAAGCTGAGTTGGGTGACCTTGAGTTGCAGGTTGACAAAATGAAACTGGAAAATGCAACCCTATACAAGCAGTTTACGCATGCAAGTCAACAATTCCGTGATGCTGATACAAATAACCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCACTAGGAGCAGTTTCACCTTAAACAACCAATTTCTTCAGACTCAAATGAGCACACTACCACAACTCAGCACGACTAATCTGCGCGGCATAGCACACGTCTCGCCGACCATCACTGTCCATGGAAATGATGCTTCATATGGTGGTGTCACAATTGGTGGACAGAACTCAACTCATGGGCTTGGAAACTTGGATATACCTTACAACAATGTCAACAATGGAGTTTTTAGTGATGCTGCTAGTTCTGTGACTATGTGGCAGTAA 966 0.4462 MEPAPQSLITPPTVFPGFFKRMGEFDLYDDHWYNDFDHVKPDYFRFGTDALIGDVFSDDLTPAAATHNNTDAVTAFSTCGDTIICSQNVTPMNSTISATIDSQASNCGTVGSPVSANKPNSSENQTKGATSGSSEQCDEDDEYGPCEQSTNPLDVKRHRRKVSNRESARRSRRRKQAELGDLELQVDKMKLENATLYKQFTHASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTLNNQFLQTQMSTLPQLSTTNLRGIAHVSPTITVHGNDASYGGVTIGGQNSTHGLGNLDIPYNNVNNGVFSDAASSVTMWQ* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1488 321 SMART brlzneu 152 216 IPR004827 GO:0003700|GO:0006355
Lan3g1488 321 Gene3D - 155 211 - -
Lan3g1488 321 Coils Coil 214 234 - -
Lan3g1488 321 PANTHER BASIC LEUCINE ZIPPER 63 58 320 - -
Lan3g1488 321 Pfam bZIP transcription factor 155 200 IPR004827 GO:0003700|GO:0006355
Lan3g1488 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 159 174 IPR004827 GO:0003700|GO:0006355
Lan3g1488 321 PANTHER BZIP TRANSCRIPTION FACTOR 58 320 - -
Lan3g1488 321 Coils Coil 165 199 - -
Lan3g1488 321 SUPERFAMILY Leucine zipper domain 156 206 IPR046347 GO:0003700|GO:0006355
Lan3g1488 321 MobiDBLite consensus disorder prediction 110 133 - -
Lan3g1488 321 MobiDBLite consensus disorder prediction 110 176 - -
Lan3g1488 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 154 217 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1488 Lan-Chr3 26377205 26381781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1488 101 298 bZIP Transcription Factor Family AT5G24800 52.451 1.35e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan3g1488 bZIP_1 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1488 K25784 - gmx:780555 349.362