Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1478 ATGTGGTTGCCGAAGAATAATGCTGAGATGAAGGATGGTGTGAATGGATTGGTGGCAGTGGCAATAGATAAAGAAAAAGGAAGCCAAAATGCACTTAAATGGACCATTGATCATCTTCTCAATAGAAGTTCAACTGTGTTTCTCATCCATGTCAAGCTTAAGCCAGGCTCTCTTTCCACATCGCCTTCTCTTTTCGGCCAAAGGTCAGGGATGCAAATTGGTGATGAGGGTCCAGTGGGAAAAACAGACCCTGATGCCCTTAACAAAAATATTTTCCTACCATATCGTGTCTTTTGTACAAGGAAAGATATACAATGCAAGGATGTGCTACTAGAAGATGTAGATGTATCCAAAGCTTTGATTGAATATGTTTCTAATGCAGGAATTGAGCATCTGGTTCTTGGCTCCTCAACCAAAGCTGGTTTGTTTAAAAAATTCAAGGTATTAGATATTCCGGGAATTGTCTCAAAAGGGGCACCAGATTTCTGTACAGTCTATGTAGTTGCTAAAGGAAAGATTAATTCAATGCGATCTGCTACTCGTTCTGCTCCAGTTGTTTCTACTATGCTTAGCCAGTTAAGTCAAGCTAGTGCCAAGTCAGAACCATTAGAGCCACCACATGTGCCAGTAGTTCCTGCTAGTGTTAAAGAACCTGAATGGCGACCCGCAAATGCTACATCACTTGAATCACAAGACGGTACAGAATTATTCAGGTCACCATTCACTAGGAAAGGTTACAGTGGTAGGTCATATGTCGAAAGTTCAATTCCAGATAGTGACATATCTTTTGTAAGCTCCGGAAGGCCTAGTGAAGACTGCATGTTCCCTTCGTTATATAGCAACTCGGATACAACTATATCCAATTCTCGACTATCATATAGCTCAGACACGGATGGGAACTATAGCTTCGAGTCTATGCCTTATGGAAGGAGGTCGGTGGAAGTGGGAACTCCTCTTGAATTCACATCTCTCTCATTTGAAAGTGATAGGCTTTCATCTTCTACATCACAAGCCGTGGATGATGTCGAGGCTGAAATGAGGAGATTGAAGTTAGAGCTCAAGCAAACAATGGAAATGTATAACACAGCATGTAAAGAGGCACTCACAGCACAGCAGAAGGCAGTAGAACTTCAACGTTGGAAATTGGAGGAAGAGAGAAGATTAGAAGAGGCAAGGCTCGCTGAGGAAGCTGCGTTGGCGATTGCAGAAAAGGAGAAGGCCAAATCTAAAGCAGCGATTGAGGCAGCTGAAGCACAAAAGAGGATTGCAGAACTAGAAGCACAGAAGAGACTTAATGCAGAAATGAAAGCACTTAAAGAAGCAGAAGAGAAAAGAAGAGCACTTGATGCTTTAGGAAACATGGATGTGAGGTATAGAAGGTATTCAATCGAAGAGATTGAAGCTGCAACAGAGTTTTTCGCAGAGTCCTTAAAGATTGGAGAAGGAGGTTATGGTCCAGTTTTTAAGTGCCTTCTGGAGCATACACCCGTTGCAGTGAAGGTTTTGCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTAAGCTGCATACGGCATCCAAATATGGTTCTCCTCCTAGGAGCCTGTCCAGAATATGGGTGCCTTGTGTATGAGTACATGGCTAACGGAAGCTTGGATGATCGCCTATTTCGTCGCAGCAACACTCCTCCACTTCCCTGGCAGGTCAGGTTCAAAATTGCAGCTGAAATCGGCACTGGCTTGTTGTTCCTTCACCAAACAAAACCAGAACCTTTAGTGCACAGGGACCTGAAACCAGCCAACATCCTGCTTGACAGCAACTATGTTGCCAAAATCAGTGATGTTGGTTTGGCAAGGCTAGTTCCACCATCTGTGGCAGATAGTGTGACACAATATCGAATGACATCGACGGCCGGAACTTTTTGCTATATAGATCCTGAGTACCAGCAAACAGGAATGTTGGGTGTAAAATCAGACATATACTCCCTTGGGATCATTTTCTTGCAACTTTTGACAGCAAAGTCTCCAATGGGATTGGCACATCATGTTGAAGGGGCCATTGAGAAGGGAACTTTTACTGAGATGTTGGATCCAACAGTGCCTGACTGGCCAGAAGAAGAGACCTTGAGCTTTGCAAAGATGGCAGTGCAGTGTGCCGAATTAAGACGGCGAGATAGACCTGATCTTGGAAAGGTTGTCCTACCAGAACTCAACAAGCTAAGAGAAATTGCTGAAAATAGTAATCTTCATTTAGTGTTGGGTGGCTATGTAAATGTGCATCACCAGAGTCAAGTTTCTTTACAGCTTGATGGAAACTCTTCACTTCCTGTTTCTGGAGACAATTGA 2343 0.4353 MWLPKNNAEMKDGVNGLVAVAIDKEKGSQNALKWTIDHLLNRSSTVFLIHVKLKPGSLSTSPSLFGQRSGMQIGDEGPVGKTDPDALNKNIFLPYRVFCTRKDIQCKDVLLEDVDVSKALIEYVSNAGIEHLVLGSSTKAGLFKKFKVLDIPGIVSKGAPDFCTVYVVAKGKINSMRSATRSAPVVSTMLSQLSQASAKSEPLEPPHVPVVPASVKEPEWRPANATSLESQDGTELFRSPFTRKGYSGRSYVESSIPDSDISFVSSGRPSEDCMFPSLYSNSDTTISNSRLSYSSDTDGNYSFESMPYGRRSVEVGTPLEFTSLSFESDRLSSSTSQAVDDVEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKEAEEKRRALDALGNMDVRYRRYSIEEIEAATEFFAESLKIGEGGYGPVFKCLLEHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRSNTPPLPWQVRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDSNYVAKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLLTAKSPMGLAHHVEGAIEKGTFTEMLDPTVPDWPEEETLSFAKMAVQCAELRRRDRPDLGKVVLPELNKLREIAENSNLHLVLGGYVNVHHQSQVSLQLDGNSSLPVSGDN* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1478 780 Gene3D HUPs 17 149 IPR014729 -
Lan3g1478 780 CDD STK_N 17 171 - -
Lan3g1478 780 Coils Coil 339 359 - -
Lan3g1478 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Lan3g1478 780 Gene3D Transferase(Phosphotransferase) domain 1 546 751 - -
Lan3g1478 780 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 773 - -
Lan3g1478 780 Gene3D Phosphorylase Kinase; domain 1 452 545 - -
Lan3g1478 780 PANTHER OS02G0152300 PROTEIN 5 773 - -
Lan3g1478 780 SUPERFAMILY Protein kinase-like (PK-like) 455 732 IPR011009 -
Lan3g1478 780 Coils Coil 365 451 - -
Lan3g1478 780 Pfam Protein kinase domain 476 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1478 780 ProSiteProfiles Protein kinase domain profile. 473 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1478 780 SMART serkin_6 473 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1478 Lan-Chr3 26322247 26327827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1478 1 746 Receptor kinase-like Gene Family AT1G78940 57.950 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan3g1478 Pkinase 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1478 - - gmx:100803461 1060.83