Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1473 ATGGGTTTCTCGAAAACAGAGGAACATAAAGCAATTCAAGAAGCAGCTTCTGAGGGCATTAAGGGAATGAAAAATCTCATCAATCTCCTCTCTCACCAACCCTCTCATTCTCATTCTCATTCCGATCTCACCGATTTCACTCTCTCTAAATTCAACAACCTCATCTCTTTACTCAACCGCACCGGCCATGCTCGTTTCCGCCGTGCTCCCCTCCACCAAACCTCCACCTCAACTGACCTCCCTCCACCACCACCGCCGCCACACTTTCATACTCCCACGCACGTCCTGCCTCATCACGCGCCGGTTACATTCGCTCCCACGCAGTCTCATAGTTTGACTCTTGATTTCACAAAGCCTAATAACGTTTTGAGTTCAAACGCTAAGTCCATGGAGCTTGAGTTTTCTAAGGATACTACAACCTTCAGTGTTTCATCAACCTCTTCTTTTATGTCCTCCGCTATTACCGGAGACGGTAGCGTTTCTAACGGGAAGCAAGGATCTTCGATTTTCATTACTCCGGCGGCGACCGCTATCTCCGGAGGGAAGCCGCTAATGTCGTTGCCGCCGTTCAAAAAGAGGTACCATGACCACCGGGAACACTCTGGCGATGTCTCCGGCAAGATCTCCGGTTCTGGAAGCCAGTGCCACTGCACCAAGAGAAGGAAAAATCGGGTGAAGAACACGGTTAGAGTTCCGGCGATAAGTTCTAAGATCGCAGATATTCCGGCAGACGAGTATTCATGGAGGAAATACGGTCAGAAACCGATCAAGGGGTCACCATATCCAAGGGGTTATTACAAGTGTAGCACAGTGAGAGACTGTCCAGCTAGGAAACACGTGGAGCGTGCCACAGACGATCCCGCTATGCTTATCGTGACGTACGGAGGGGAGCACCGTCACGAGATTCAAGCCGCGATGCAGGAGAATATTTGTGGGGAAATGGGTTTGGTATTTGAGTCAACGTAG 966 0.5 MGFSKTEEHKAIQEAASEGIKGMKNLINLLSHQPSHSHSHSDLTDFTLSKFNNLISLLNRTGHARFRRAPLHQTSTSTDLPPPPPPPHFHTPTHVLPHHAPVTFAPTQSHSLTLDFTKPNNVLSSNAKSMELEFSKDTTTFSVSSTSSFMSSAITGDGSVSNGKQGSSIFITPAATAISGGKPLMSLPPFKKRYHDHREHSGDVSGKISGSGSQCHCTKRRKNRVKNTVRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRDCPARKHVERATDDPAMLIVTYGGEHRHEIQAAMQENICGEMGLVFEST* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1473 321 MobiDBLite consensus disorder prediction 195 221 - -
Lan3g1473 321 Gene3D WRKY domain 213 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan3g1473 321 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g1473 321 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 319 IPR044810 GO:0003700
Lan3g1473 321 SUPERFAMILY WRKY DNA-binding domain 240 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan3g1473 321 Pfam WRKY DNA -binding domain 244 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan3g1473 321 PANTHER WRKY PROTEIN 7 319 - -
Lan3g1473 321 Pfam Plant zinc cluster domain 192 240 IPR018872 -
Lan3g1473 321 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1473 Lan-Chr3 26287708 26289267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1473 1 320 WRKY Transcription Factor Family AT2G24570 56.061 2.02e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan3g1473 WRKY 4.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1473 - - gmx:100127394 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0769 14 14598046 14599756 Lan3g1473 3 26287708 26289267 LSH