Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1454 ATGTCAACGTCAGCATTTCCACCACCTCCACCTTATTATAGACTCTACAAAAATTACTCACAAGACCCTAATTCTGCTCCTGAGCCTCCACCACCTATTGAAGGAACCTATGTTTGTTTTGGAGCCACTTACACTACAAGTGACAATCTACCAAGCTTAGAAGAGCAAGGGGTGCGCCAGCTCTATCCTAAGGGGGCGAATGTTGATTTCAAGAAAGAGTTGAAGTCACTTAATAGAGATTTGCAGCTACACACTTTAGAGCTTGCTGACATTCTTATTGAGAGACCGTCACAGTATGCTAGGAGAATTGAGGAAATTTCGACTGTATTCAAAAACTTACATCACCTTTTAAACGCACTGCGTCCTCATCAGGCAAGATCAACATTAGTTCGCATCTTGGAACTTCAGATACTGAATCGCAAACGAGCAGTGGAGGATATAAAAAGGAGGAGAGAAGAAGCACAGGGTATCCTTAATGAGTCCCTGGCAATACTTGATGGCCATTAG 507 0.428 MSTSAFPPPPPYYRLYKNYSQDPNSAPEPPPPIEGTYVCFGATYTTSDNLPSLEEQGVRQLYPKGANVDFKKELKSLNRDLQLHTLELADILIERPSQYARRIEEISTVFKNLHHLLNALRPHQARSTLVRILELQILNRKRAVEDIKRRREEAQGILNESLAILDGH* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1454 168 Coils Coil 67 87 - -
Lan3g1454 168 Pfam MED7 protein 3 157 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lan3g1454 168 Gene3D - 61 159 IPR044888 -
Lan3g1454 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 167 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lan3g1454 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1454 Lan-Chr3 26089439 26094080 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Lan3g1454 Med7 1.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1454 K15148 - gmx:100792250 272.707