Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1444 ATGTATTCACTACAAAATCCACGTCCCTTCCATTTCTATAAACAACAACAACAACAAACACCTGAAATTATGATCCAACTAACCGCCACCGATAACAACCACCACCACCACCACCTCCTCCATCCACCGCCGCCACCTTCTCTAATCCTCACCGAGAGCAGCGGCGACGACCCAGAACTCGACCAATTCAAAGCCCCCAAGAAACGCGCGGAGACATGGGTTCACGACGAGACTCGAAACCTAATCGCATTGAGGCGTGAGATGGACGCGCTTTTCAACACTTCCAAATCGAACAAGCACCTCTGGGACCAGATTTCTGCGAAGATGAGGGAAAACGGGTTCGATCGGTCTCCGGCTATGTGCACTGATAAGTGGAGGAATTTGCTTAAGGAGTTCAAGAAAGCGAAGCACCAAGATAATTGTGGGAATGTTAAGATGAGTTGTTATAAAGAGATTGATGAGATTTTGAGAGAGAGGGTTAAGAATTTGCAGTATAAGACACCTAAAGTTGACACCTTTATGCACTTTCTTGATAAAGGTTTTGAGGATACTAGCATCTCTTTTGGGCCTGTTGAAGCTACCGGAAGACCAACACTCAACCTTGAGAGAAGTTTGGATCATGATGGGCATCCTCTTGCCATTACCTCAGCTGATGCTGTTGCAGCAAGTGGAATCCCTCCTTGGAATTGGAGAGAAACTCCTGAGAATGGTGGGGAAAGTCAGCCATGTTGTGGCAGGGTTATATCTGTGAAATGGGGTGATTATACAAGGCGGATAGGTATTGATGGTACTGCGGGAGCCATCAAGGAGGCAATCAAGGCTGCTTTTAGATTGAGAACTCGACGTGCATTTTGGTTGGAGGATGAAGAGCAAATTATCCGAAGTATTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCTGTTAAAATATGCCTCTATGATGAGTCTGACCATATCTCTGTGCATACTGAAGAGAAGATCTTCTACACTGAAGATGATTACCGGGATTTTCTGTCGCGCCGAGGTTGGACATGTCTAAGGGAGTTTAATGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATATATCGCGGTGTGAGTTGA 1137 0.4547 MYSLQNPRPFHFYKQQQQQTPEIMIQLTATDNNHHHHHLLHPPPPPSLILTESSGDDPELDQFKAPKKRAETWVHDETRNLIALRREMDALFNTSKSNKHLWDQISAKMRENGFDRSPAMCTDKWRNLLKEFKKAKHQDNCGNVKMSCYKEIDEILRERVKNLQYKTPKVDTFMHFLDKGFEDTSISFGPVEATGRPTLNLERSLDHDGHPLAITSADAVAASGIPPWNWRETPENGGESQPCCGRVISVKWGDYTRRIGIDGTAGAIKEAIKAAFRLRTRRAFWLEDEEQIIRSIDRDMPLGNYTLHLDEGMAVKICLYDESDHISVHTEEKIFYTEDDYRDFLSRRGWTCLREFNGYRNIDNMDDLRPGAIYRGVS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1444 378 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 6 377 - -
Lan3g1444 378 Pfam Myb/SANT-like DNA-binding domain 72 155 IPR044822 -
Lan3g1444 378 Gene3D - 73 135 - -
Lan3g1444 378 ProSiteProfiles Myb-like domain profile. 65 129 IPR001005 -
Lan3g1444 378 CDD GT1 71 136 - -
Lan3g1444 378 SMART sant 69 131 IPR001005 -
Lan3g1444 378 PANTHER - 6 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1444 Lan-Chr3 26011709 26015407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1444 45 377 Trihelix Transcription Factor Family AT3G25990 69.452 8.06e-175 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan3g1444 Myb_DNA-bind_4 4.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1444 - - ccaj:109807736 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0037 15 230249 234055 Lan3g1444 3 26011709 26015407 LSH