Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1410 ATGGCATTTTGTAACAAGCTTGGAAATCTCTTGAGGCAGGGTGTTGCCCAGAGCAGACAAGAAAGCATGCTTAACTATATTCGCATGATGTCTTCTAGCAAGCTTTTTATTGGAGGGCTTTCATATGGTGTTGATGACCAGTCTCTTAGGGATGCATTTGCCAGCTTTGGTGATGTTGTTGAGGCTAAGGTTATCACCGATAGAGACACTGGACGATCAAGGGGATTTGGATTTGTCAACTATGACAGTGAAGAGTCTGCAAATACAGCACAGTCTGCCATGGATGGGCAGGATCTAAATGGGCGCAACATTCGGGTATCATTTGCGAACGAAAGACCACAAGGACCTCGAACTCCTGGTGGTGGCGGCGGCTTTGGAGGTGGCGGCGGCTATGGAGGTGGTGGTGGTTATGGTGGTGGTAATCGCAGAGGTGGAGGTGGTGGAGGGTTTGGTGAGGAAGGCTATTAA 468 0.4893 MAFCNKLGNLLRQGVAQSRQESMLNYIRMMSSSKLFIGGLSYGVDDQSLRDAFASFGDVVEAKVITDRDTGRSRGFGFVNYDSEESANTAQSAMDGQDLNGRNIRVSFANERPQGPRTPGGGGGFGGGGGYGGGGGYGGGNRRGGGGGGFGEEGY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1410 155 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 155 - -
Lan3g1410 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Lan3g1410 155 SMART rrm1_1 34 107 IPR000504 GO:0003723
Lan3g1410 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 105 IPR000504 GO:0003723
Lan3g1410 155 Gene3D - 12 153 IPR012677 -
Lan3g1410 155 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 155 - -
Lan3g1410 155 SUPERFAMILY RNA-binding domain, RBD 28 141 IPR035979 GO:0003676
Lan3g1410 155 MobiDBLite consensus disorder prediction 110 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1410 Lan-Chr3 25740243 25742077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1410 32 132 Eukaryotic Initiation Factors Gene Family AT4G34110 28.000 4.73e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1410 - - lang:109344110 238.039