Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1408 ATGCATTCTTATAATCTTCTTCATCATCATCATCCTTGTGTTGTTGTATTAACTAGAAGAAGTAATTGTGGGTGGTTCTATTTGGGTAGTAATAATTCCGTGAAGTTTTCAACTTCATTGAAATTAAGAGGTTCATTTTCAACTTCATTGAAAATAAGAGGTTCATCATCAGGTTCATGGTGTGAAAATGAGATGAGCTTGTATTCAGTATTGGGAGTGGGTGAAACGGTGTCGTGTAAAGAGGTGAAGCAAGCGTATAAGAAGATGGCAAGGAAATATCACCCTGACGTGTCACCAGGTGATAGGGTTGAAGAGAATACAAAGAGATTCATAAAGTTGAAAGAAGCTTATGAAACTCTTTCTGATCCAATAACAAGAGCTGTTTATGATACAAATTTCGCTATTTCCCTTAACTTTGCTTCTTCCTCTCATTACCATCATCATCAGGTGAGTGAACAAAAAAAGGAATGGAAAAAAGGGTGGGAAAGTCAGTTATCAAAGCTGAAGAGAAGAAGTGAGTGCAGAGATAGGAGTGAAGAGAATATGCCTTGGGCTGCTAGGATGGGTCAAAACATGGATGTATTATTAGATAATTATTATGATCACTAG 609 0.3678 MHSYNLLHHHHPCVVVLTRRSNCGWFYLGSNNSVKFSTSLKLRGSFSTSLKIRGSSSGSWCENEMSLYSVLGVGETVSCKEVKQAYKKMARKYHPDVSPGDRVEENTKRFIKLKEAYETLSDPITRAVYDTNFAISLNFASSSHYHHHQVSEQKKEWKKGWESQLSKLKRRSECRDRSEENMPWAARMGQNMDVLLDNYYDH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1408 202 CDD DnaJ 68 122 IPR001623 -
Lan3g1408 202 SUPERFAMILY Chaperone J-domain 62 136 IPR036869 -
Lan3g1408 202 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan3g1408 202 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan3g1408 202 PRINTS DnaJ domain signature 105 125 IPR001623 -
Lan3g1408 202 SMART dnaj_3 65 125 IPR001623 -
Lan3g1408 202 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Lan3g1408 202 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 50 191 - -
Lan3g1408 202 Pfam DnaJ domain 67 130 IPR001623 -
Lan3g1408 202 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Lan3g1408 202 Gene3D DnaJ domain 56 158 IPR036869 -
Lan3g1408 202 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 50 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1408 Lan-Chr3 25727377 25728107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1408 68 131 C2H2 Transcription Factor Family AT1G74250 40.299 1.16e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1408 - - lang:109344106 420.624