Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1395 ATGAATGCTTGTGGTGGGATGGAGAGTTTGAGGAAATCGTTGAAATCATATGGTTCTCGCAAACATGTAAGGAAAATATCAGCAGGTGGTGGAAGTCAAGAGTCTGTGTTTGAAGAGCTCCCCATCCTTCTCTCTCAACAATCTTGTTCTGTCACTATCAAAAGCGACGATGAGGATAACAATATGATGAGAGATAATAATAATAATAATAATAATCATCATAACAACAATGGTGGTGGTGGTGATTCGGGTGATCCACCATCCCAACTAATTGGTAGATTCTTGGACAAACAAAAAATAATGTCACCATCTAGCATTGGTGAAATGGCCCTTGATATGGATTTAAAAATGGATGAGCTACGTGATCTCCCTCTCAATGATTCCTCTGTTTCTAATAGTAATAGTAATGAAACTCCTCCAACAACTAGTTACAAAACACCAACACCTCAATATTCCCTAAAACGCCCTCCTCATCCACACCATGATAGGAACACCTCCAACTCTGCATTGCTCCTCAAAACAAAAACAAGATCTAGATTGCTTGACCCTCAATTCTCTCAGCCTCAACAACAAGACTACTCCAGTCCTATCCCAAAGTCCTCAGGACAACTCTTCTCTACCTTCATTGGCACCAAGAAGGGCGACAATGACGATGAAGATGATCCTTTCTTAGAAGAAGATCTCCCAGATGAGTATAAGAATGAGACTCATTTCAGCCTCTGGGTTCTCCTTGAGTGGTTGAGCCTCATTTGCATCATCGCCGCCTTTATCGCCACCCTCTGCATCCCTTCCTGGAGGGACAACAATCTTTGGGACCTTAGGTTATGGAAATGGGAGGTCATGATTCTAGTTCTAATATGTGGCCGATTAGTCTCCGATTGGGTCATCCGCATTGTTGTCTTCTGCATAGAGAGGAATTTCGTGTTGCGTAAGAGAGTGTTGTATTTTGTCTATGGTGTTAGGAAGGCTGTCCAGAATTGCTTATGGTTGGGTCTTGTCTTGATTGCTTGGCACTTATTATTTGATAAGAGAGTGGAGAGGGAAACCCGAACTGAATTTCTAAAATATGTGACCAAGGTATTGGTGTGTTTCTTGGTGGCCACGGTTGTGTGGCTTCTCAAAACTCTCGGGGTGAAGGTACTAGCTTCTTCATTTCATATGAGCACTTATTTTGATAGGATTCAAGAGTCATTGTTTAATCAATTCATAATAGAAACACTATCAGGACCACCCACCATAGAGGATGATAAGTTAGCTTCTGAGGTACGAAAGCTGCAGAATGCAGGGGTGGCCATACCACCAGACCTAAGAGCCTCTGCCTTCCCAACAATGAAGAGTGGAAGGGTCAACAAGAGTGGAGTGCTTAAAAGTGCAACATTTTCTCAACGTTATTCCACTAAGAAGGTGGCAATGGATGATAATGGGATAACTATTGATCATCTTCATAAGCTGAATCCAAAAAATGTGTCAGCTTGGAATATGAAAAGGCTAATCAATATGGTCCGCCATGGGGCTCTTACTACCCTTGATGAGCAAATACTTGATGATTCTACACAACAAGGGGATGAGTCCGCCAAGCAGATTAGAAGTGAAAATGAGGCTAAAGCAGCAGCCAAGAAAATATTTCACAATGTTGCTAGGCCTGGTTCCAGGTACATATACCTTGAGGATTTAATGCATTTTATGCGAGAAGATGAAGCTTTCAAAACCATAAATCTCTTCGAAGGAGCATCTGAAACCAGCAAAATCAGCAAATCGGCCTTGAAGAACTGGGTGGTGAATGCCTTCCGGGAGAGGAGAGCACTTGCTTTGACATTGAATGATACCAAAACTGCAGTGATCAAACTCCATCGAATGCTCAATTTTATGGTGGCCGTTATTGTATTGATTATTTGGCTTTTAATATTGGAAATTGCCACCAGCAAAGTTATTGTATTTGTAACCTCACAGATTGTGGTGGTTGCATTTGTATTCGGAAATACCTGCAAAACCATATTTGAATCAATTATTTTCTTATTTGTCATGCATCCATTTGATGTAGGAGACAGGTGTGAAATTGACGGAGTCCAGATGGTTGTAGAAGAAATGAACATATTGACAACCATATTTCTGAGATTTGACAATCAAAAGATCATGTTCCCTAACAGTGTCCTAGCTACTAAGGCCATACATAATTTCTATCGGAGTCCAGATATGGGAGATGCTCTTGAATTCTTTATACATGTCTCTACCCCGCCTGAAAACGTTACACTTATGAAACAAAGAATAGTGAGTTATGTTGATAATAAGAAGGAACATTGGTATCCTTCACCTACGATAGTGTTCAAGGATCATGAAAGTTTAAACATGATAAGAGTGGCAGTTTGGCCAACTCATAGAATGAACTTCCAAGATATGGCAGAAAGATTTCTGAGGAGATCCCTTTTGATTGAAGAGATGGTCAAGATTTTCAAGGACCTTGACATTCAGTACCGTCTCTTGCCCATTGATGTTAACATTAGAAGCATGCCTACCACTTCTGATCGTCTTCCACCTAGCTGGTCCACAATCACAAGTTGA 2559 0.4091 MNACGGMESLRKSLKSYGSRKHVRKISAGGGSQESVFEELPILLSQQSCSVTIKSDDEDNNMMRDNNNNNNNHHNNNGGGGDSGDPPSQLIGRFLDKQKIMSPSSIGEMALDMDLKMDELRDLPLNDSSVSNSNSNETPPTTSYKTPTPQYSLKRPPHPHHDRNTSNSALLLKTKTRSRLLDPQFSQPQQQDYSSPIPKSSGQLFSTFIGTKKGDNDDEDDPFLEEDLPDEYKNETHFSLWVLLEWLSLICIIAAFIATLCIPSWRDNNLWDLRLWKWEVMILVLICGRLVSDWVIRIVVFCIERNFVLRKRVLYFVYGVRKAVQNCLWLGLVLIAWHLLFDKRVERETRTEFLKYVTKVLVCFLVATVVWLLKTLGVKVLASSFHMSTYFDRIQESLFNQFIIETLSGPPTIEDDKLASEVRKLQNAGVAIPPDLRASAFPTMKSGRVNKSGVLKSATFSQRYSTKKVAMDDNGITIDHLHKLNPKNVSAWNMKRLINMVRHGALTTLDEQILDDSTQQGDESAKQIRSENEAKAAAKKIFHNVARPGSRYIYLEDLMHFMREDEAFKTINLFEGASETSKISKSALKNWVVNAFRERRALALTLNDTKTAVIKLHRMLNFMVAVIVLIIWLLILEIATSKVIVFVTSQIVVVAFVFGNTCKTIFESIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRFDNQKIMFPNSVLATKAIHNFYRSPDMGDALEFFIHVSTPPENVTLMKQRIVSYVDNKKEHWYPSPTIVFKDHESLNMIRVAVWPTHRMNFQDMAERFLRRSLLIEEMVKIFKDLDIQYRLLPIDVNIRSMPTTSDRLPPSWSTITS* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1395 852 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 58 136 IPR016688 -
Lan3g1395 852 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 168 849 IPR016688 -
Lan3g1395 852 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 168 849 - -
Lan3g1395 852 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 58 136 - -
Lan3g1395 852 MobiDBLite consensus disorder prediction 125 150 - -
Lan3g1395 852 MobiDBLite consensus disorder prediction 182 201 - -
Lan3g1395 852 Gene3D - 677 726 IPR023408 -
Lan3g1395 852 PIRSF Memb_At2g17000 10 852 IPR016688 -
Lan3g1395 852 SUPERFAMILY Sm-like ribonucleoproteins 667 726 IPR010920 -
Lan3g1395 852 MobiDBLite consensus disorder prediction 56 90 - -
Lan3g1395 852 Pfam Mechanosensitive ion channel 619 820 IPR006685 GO:0016020|GO:0055085
Lan3g1395 852 MobiDBLite consensus disorder prediction 64 83 - -
Lan3g1395 852 MobiDBLite consensus disorder prediction 124 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1395 Lan-Chr3 25587171 25590820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1395 85 852 Mechanosensitive Ion Channel Family AT1G78610 58.911 0.0 872