LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan3g1384	ATGTCATCAGCATCATCGTCATCGCAGCAATATTCAGAAGATCTGGATTTGCTACTTTCTCTTCAAGACAGTGTTCCCGAAAGCCCTCCTCTTGAACATTCTATTGATGTTGCCCCCAACCCTCGTATCCCTCTCAAACCTAAATCCAAACCCAAACCCAAACCTCGTCCTCTCACTGACGATGCTGATCTGGACACCTTCTCTGGTCTTCGCATAAGGGACCGATTGTTGACCTCTATGGAGCTTAGGGATTCATTCTCTGATATTCGTTTTGTTCGCTTATCTGTTATCAAGAATTTGTTGAATGGTGATAGTTTTAGTGGAAGCTGGGTAACTGTGGGTGTGCTAACTGAGAAAGGGAGTATAAGGAAAACATCAACAGGGAAAGAATATTGTATTTACAAAATAACTTGTTTGGATGAAAACACTGTTTCTCTTTTCTTGTTTGCTCATGCTTATCAATCCCACACCCAACACAAACCTGGAACCGTCTTTGCACTCTTCAATTCTAATGTCCGCAGGGATACCAACGGTGATGGTTATTCTCTGAGTATATATTCCCCGGGCCAAATATTGAAGATGGGAATGTCTGTTGATTATGGAGTTTGCAAGGGGAGAAGACCAGATGGGATGGCTTGTACGCTCGCTATAAATAAACGCAATGGAACATACTGTAAATACCATAAAAATAAAGCATCAGACAAATATTCCACAATGCGAACTGAGCTCAAGGGAGGAAACTTAAGAACGGCATTTAGGCCTCGGGATTATCTCAAGTCAGAAGGAATTCACTTAGTTGACCCTCTTGCTAATAAAACAAACATGAAAAAGTCTCAGTCACTGAAATTGATGTCTGTGGATGGTCTTCGAAGAGCATTGAGCAATGCAGGAAAGGTGACTACAAATATGCATTCACAAGGGATTAGATTTCTTACCGAGGTCACAGGCAAATTGGGTCAAGCACCAGTGAGTAGAGGACCTAAGATTCCAAATGAACAAAGCAATTGCACAGGAAAGAGGAAATCGTCTTCTGTGAATGTAGGATCCTCTGAAATGATGAAAAATCAGCACTTGGATGCAAAAAGAGTAAAAACAGATGGGCAAGTTTTGGTTGATAAAACAACAAGTACGGGAAAGATGATTGAATTAGACTTTGTGAGTTCAGATGAGGACTTCTGA	1179	0.4114	MSSASSSSQQYSEDLDLLLSLQDSVPESPPLEHSIDVAPNPRIPLKPKSKPKPKPRPLTDDADLDTFSGLRIRDRLLTSMELRDSFSDIRFVRLSVIKNLLNGDSFSGSWVTVGVLTEKGSIRKTSTGKEYCIYKITCLDENTVSLFLFAHAYQSHTQHKPGTVFALFNSNVRRDTNGDGYSLSIYSPGQILKMGMSVDYGVCKGRRPDGMACTLAINKRNGTYCKYHKNKASDKYSTMRTELKGGNLRTAFRPRDYLKSEGIHLVDPLANKTNMKKSQSLKLMSVDGLRRALSNAGKVTTNMHSQGIRFLTEVTGKLGQAPVSRGPKIPNEQSNCTGKRKSSSVNVGSSEMMKNQHLDAKRVKTDGQVLVDKTTSTGKMIELDFVSSDEDF*	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan3g1384	392	Pfam	Primase zinc finger	195	240	IPR015408	GO:0005634\|GO:0006260
	Lan3g1384	392	MobiDBLite	consensus disorder prediction	22	62	-	-
	Lan3g1384	392	MobiDBLite	consensus disorder prediction	321	351	-	-
	Lan3g1384	392	MobiDBLite	consensus disorder prediction	327	351	-	-
	Lan3g1384	392	Gene3D	-	55	229	IPR012340	-
	Lan3g1384	392	PANTHER	PROTEIN MCM10 HOMOLOG	21	312	IPR040184	GO:0003690\|GO:0003697\|GO:0006270

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan3g1384	40	391	Core DNA Replication Machinery Family	AT2G20980	50.142	6.39e-107	318

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan3g1384	K10736		-	gmx:100527758	464.151