Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1349 ATGGCACATACAATATTCCAAATCATTATTCTCTTGTACATTTCTTCCACCCCTTCTTTCTCAACCTCTTCTAATTCTACCTTCACTCCTAAAGATAAGTTCCTCATAGATTGTGGTGCACAAAGTGCAGCAACTCTACCAGATGGAAGAGAATTCAAGTCAGATGAAAAAGCCAACTCATTTTTGAAAGCAAATGATGATTACAAAGTTTCTATCGATGATAATAATAATGCAACCAACCCTATATATAAAAATGCTAGGATTTTCATTCATGAAGCTCAATACTCATTTCCATTGACTCAACCTGGTTTTCATTGGATTCGTCTTCATTTCAATCCTATAAAAAACAATGTATTTGATCTTCAAAAGGCTACTTTCTCTGTCAACACTGATAAGTATGTTTTGCTTCACACCTTCAATATCAACAACAATAATAAGAATGTTACTAGTCCTATTCTTAAGGAGTTTCTCATCAATGTAACTGAACCTAAATTCACCATATTCTTCATTCCTCTAAAAAATTCAGCTGCTTTTATCAATGCCATTGAGCTTGTTTCAGCTCCTGATAATCTCATCTTTGACAATGCTGCAACCCTTTTCCCTGTGGGCCAGTTTTCTGGTTTAAACAACTATGCTTTTCAACCTGTTTATCGCTTAAACAATGGAGGTCCTTTGCTCACACCATCAAATGACACATTGGGAAGGATATGGGAAAATGATGAGCCTTTCCTCACAAATAAGAACTTGGCGAAGAGTGTTTCGGTAGCTACGAAAGTTATCATCTTCCCTGCTGATACGCCTACTATATCGCCTCTCATTGCGCCACAAACTGTTTATGCTTCTGCCACTGAAATGGGTGATGCTGGTATTAAGCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTAGACACTTCTTTTAGTTACTTGGTTAGATTGCATTTCTGTGATATTGTAAGCAAAGGGCTTAATGAACTCTATTTTAATGTCTATGTTAATGCGAAAATGGCGATTCCTAACTTGGATTTATCAGCTACTACTGGTGCTTTGGCAACACCATATTACAAGGACATTGTGGTGAATGCATCATTGATGTCTGAGGCACTAACTGTTCAGGTTGGTCCGACCGATGCTGAGGGAGGGAATGCAAATGCTATTATGAATGGAATAGAGGTTTTGAAGATAAGCAACTCTGTGGATAGTTTGGATGGAGAATTTGGAGTTGATGGAAGAAAAAGTGGTGGTTCACATCGCGGGGTGGTGGCTGCAGTAGGATTTGGAATGATGTTTGGAGCCTTTGTTGGTCTTGGTGCTATGGTAATCAAGTGGCATAAGAGGCCACATGATTGGGAAAAGAAGAATAGTTTCTCTTCATGGTTACTCCCTCTATATGCTGGTGATTCAAGCTTCATGAGCAGCAAGAACTCAATGGGGTCTCATAAGAGCAACTTTTACTCATCAACTAGGGGTTTAGGTAGGTATTTCTCCTTTTCGGAATTACAGGAAGCAACCAAGAACTTTGATTCTAGTGCTATTATTGGTGTTGGAGGATTTGGCAATGTGTATTTGGGTATCATTGATGTGGGGACTCAGGTTGCAGTTAAGAGAGGAAATCCACAATCAGAACAAGGTATCAATGAGTTTCAGACCGAGATTCAAATGTTGTCGAAGCTAAGACATAGACATTTGGTGTCATTGATAGGATATTGTGATGAGAATGATGAGATGATCTTGGTTTATGAATACATGCCTAATGGACATTTTAGAGACCATCTTTATGGAAACAACTTGCCTTCACTTTCATGGAAGCAGAGGTTAGAGATATGCATTGGCGCGGCTCGTGGCCTTCACTACCTCCACACGGGCACCACACAAGGTATCATTCACCGCGATGTTAAGACAACAAATATTTTGCTTGATGAAAACTTCACTGCCAAGGTATCTGATTTCGGGCTTTCCAAGGATGCACCTATGGGCCAGGGTCATGTTAGTACTGCAGTGAAAGGTAGTTTCGGTTATCTGGACCCTGAGTACTTTAGGAGGCAACAATTAACCGATAAGTCGGATGTGTATTCATTCGGTGTGGTGTTACTTGAAGCACTTTGTGCAAGACCAGTAATTAGTCCTCAATTGCCAAGAGAACAAGTTAACTTGGCTGATTGGGCAATGCAATGGAAAAGAAAAGGATTGCTTGACAAAATCATTGACCCTCTTCTTGTTGGTTCGATCAATCCGGAATCAATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGAACATGGTTCTGATAGGCCTACAATGGGGGATGTATTGTGGAATTTGGAGTATGCATTGCAACTTCAAGATGCTTTCACACAAGGAAAGGCTGAGGATGAAGCTTCTAAGTCTTCTAATGTTGTGGTTGTGGTGCCTTCTCATTCTCCAACACCATCCACAACCTCAGATGATAATGGATCAGTACAAGTGCAGACTACTTGTACTGATGAACATTCCGGAACTGCAATGTTTTCTCAGTTTTCCAATCTTAATGGAAGGTGA 2544 0.4002 MAHTIFQIIILLYISSTPSFSTSSNSTFTPKDKFLIDCGAQSAATLPDGREFKSDEKANSFLKANDDYKVSIDDNNNATNPIYKNARIFIHEAQYSFPLTQPGFHWIRLHFNPIKNNVFDLQKATFSVNTDKYVLLHTFNINNNNKNVTSPILKEFLINVTEPKFTIFFIPLKNSAAFINAIELVSAPDNLIFDNAATLFPVGQFSGLNNYAFQPVYRLNNGGPLLTPSNDTLGRIWENDEPFLTNKNLAKSVSVATKVIIFPADTPTISPLIAPQTVYASATEMGDAGIKQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNAKMAIPNLDLSATTGALATPYYKDIVVNASLMSEALTVQVGPTDAEGGNANAIMNGIEVLKISNSVDSLDGEFGVDGRKSGGSHRGVVAAVGFGMMFGAFVGLGAMVIKWHKRPHDWEKKNSFSSWLLPLYAGDSSFMSSKNSMGSHKSNFYSSTRGLGRYFSFSELQEATKNFDSSAIIGVGGFGNVYLGIIDVGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGNNLPSLSWKQRLEICIGAARGLHYLHTGTTQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPVISPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLAEHGSDRPTMGDVLWNLEYALQLQDAFTQGKAEDEASKSSNVVVVVPSHSPTPSTTSDDNGSVQVQTTCTDEHSGTAMFSQFSNLNGR* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1349 847 SUPERFAMILY Protein kinase-like (PK-like) 481 777 IPR011009 -
Lan3g1349 847 Pfam Malectin-like domain 36 394 IPR024788 -
Lan3g1349 847 PANTHER OS07G0166700 PROTEIN 18 832 IPR045272 GO:0004714|GO:0006468
Lan3g1349 847 ProSiteProfiles Protein kinase domain profile. 507 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1349 847 SMART serkin_6 507 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1349 847 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Lan3g1349 847 PANTHER BNAC03G60370D PROTEIN 18 832 - -
Lan3g1349 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Lan3g1349 847 Gene3D Phosphorylase Kinase; domain 1 468 582 - -
Lan3g1349 847 Gene3D Transferase(Phosphotransferase) domain 1 583 803 - -
Lan3g1349 847 MobiDBLite consensus disorder prediction 805 824 - -
Lan3g1349 847 CDD STKc_IRAK 513 777 - -
Lan3g1349 847 Pfam Protein tyrosine and serine/threonine kinase 511 772 IPR001245 GO:0004672|GO:0006468
Lan3g1349 847 Gene3D - 33 188 - -
Lan3g1349 847 Gene3D - 213 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1349 Lan-Chr3 25246502 25249453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1349 28 847 Receptor kinase-like Gene Family AT4G39110 68.029 0.0 1176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan3g1349 Malectin_like 7.8e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1349 - - gmx:100790759 1323.92