Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1346 ATGGGTTTTTGTGGAAGTGGAATATCATTGGGTTGTGATGAGGAGTTGAAGGTTGTGATGGATGAGAGAAAGAGGAAGAGAATGATATCTAACCGTGAATCTGCAAGGAGATCTAGGATGAAGAAAGTGAAGCATTTTCATGATTTGTCTGCAAAAATGGCTCAACTTACCAACCAAAATCATCAATTACTCACAACTCTTAACCACACTACTCAACGTTATTTCATCCTTGAGGCTCAAAACTCTGTGCTCAAGGCTCAAGTGGCTGAACTAAGCCATAGACTTCACTCCTTGAATCATATTATTGATTTCTTTAATGCCACCAATGGAGTTTTTGAAGATGTGGATTTTGCTTCAAGGACTTTTATTGACCCTGCATTGGATAATATCTTCAACCCTTTCAATGTGAGTTATATGAATCAGCCTATCATTGCTTCTGCTGAAGCCATGTTGCAGTATTGA 462 0.3853 MGFCGSGISLGCDEELKVVMDERKRKRMISNRESARRSRMKKVKHFHDLSAKMAQLTNQNHQLLTTLNHTTQRYFILEAQNSVLKAQVAELSHRLHSLNHIIDFFNATNGVFEDVDFASRTFIDPALDNIFNPFNVSYMNQPIIASAEAMLQY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1346 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Lan3g1346 153 Gene3D - 21 75 - -
Lan3g1346 153 CDD bZIP_plant_GBF1 24 74 IPR045314 GO:0003700|GO:0006355
Lan3g1346 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Lan3g1346 153 Pfam bZIP transcription factor 23 74 IPR004827 GO:0003700|GO:0006355
Lan3g1346 153 PANTHER BZIP TRANSCRIPTION FACTOR 10 149 - -
Lan3g1346 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 149 - -
Lan3g1346 153 SUPERFAMILY Leucine zipper domain 23 76 IPR046347 GO:0003700|GO:0006355
Lan3g1346 153 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1346 Lan-Chr3 25233881 25234839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1346 19 151 bZIP Transcription Factor Family AT4G34590 47.794 1.33e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan3g1346 bZIP_1 2.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1346 K25786 - lang:109344039 293.893