Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1340 ATGGCTTCATGCTCAGTGAACAAACAAAAGTTGAATATAGAGTCATATTGGAGTCCAAAAGAGAACAAATTGTTTGAAAGGGCACTTGCAAAATATGACAAAGATACACCAGATCGTTGGCATAATGTAGCTAAAGCAGTTGGTGGAAAATCAGTTGAAGATGTTAAGAGACATTATGAAATACTCTTGGAGGATCTCAGACACATTGAGAATGGTCGTGTTCCTATTCCCAACTATAAATCAACCTCAAATCCCACCAATGTTCATCATGATGATGAAAACAGGCTTATGAAGTATCTTAAGCTGAATTGA 312 0.3654 MASCSVNKQKLNIESYWSPKENKLFERALAKYDKDTPDRWHNVAKAVGGKSVEDVKRHYEILLEDLRHIENGRVPIPNYKSTSNPTNVHHDDENRLMKYLKLN* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1340 103 CDD SANT 17 63 IPR001005 -
Lan3g1340 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Lan3g1340 103 Gene3D - 12 76 - -
Lan3g1340 103 ProSiteProfiles SANT domain profile. 12 67 IPR017884 -
Lan3g1340 103 SMART sant 13 65 IPR001005 -
Lan3g1340 103 Pfam Myb-like DNA-binding domain 16 59 IPR001005 -
Lan3g1340 103 PANTHER PROTEIN RADIALIS-LIKE 3 1 83 - -
Lan3g1340 103 ProSiteProfiles Myb-like domain profile. 17 63 IPR001005 -
Lan3g1340 103 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Lan3g1340 103 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1340 Lan-Chr3 25198822 25199660 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan3g1340 Myb_DNA-binding 8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1340 - - gmx:100798314 156.762