Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1337 ATGTTGGATCGGAGAAGCATAGTGTTGTTGTCGTTTTGGTCCTTGTTGTTTTTGTTCCTGTCACTGTTTCAGCTCACATTGGAGCAGAATATTGAGAAACTGAGTTCACCCACTGAGCGTGTAGCACTTCTCCAACTAAGGGGTTCTCTTGGTTTAAGGAGCAGAGAATGGCCAATAAAACCAGACCCTTGTTTATTCTGGGTTGGAATCACATGCCACAATGGTAGTGTTGTTGGGATTAATATCTCTGGGTTCAGAAGAACTAGACTTGGTAGAAGAAACCCTCAATTTGCAGTTGATGCTTTGGCCAATTTCACTTTCTTGCAGTCATTCAATGCCTCAAATTTCATGCTCCCGGGTCCTATTCCTGATTGGTTTGGACTTCGGTTAGGGTCGCTTCGCGTGCTTGATCTTCGGTCTTGCTCTATTGTTGGTGCTATTCCTGGAAGTGTGGGGAATTTGACCAGCCTCACAAATTTGTATCTTTCTGATAACAAGCTTACTGGGACAGTTCCGGATAGTATCGGCCAACTCTTGGCGCTTTCAGTTCTTGATCTTTCGCAGAATTCGCTTACCGGGTCCATACCAACATCTTTGACCGTTCTTGTTAATCTATCATCCCTTGACATGTCTTCCAATTTTTTGTCCGGGCCGATTCCACCGGGCATTGGGGGACTTTCCAAGTTACAATACTTGAATCTTTCAAGCAATGACCTTACTTCTCTACCATCGCAAATAGGGGGTCTTGGTAGCTTGGTTGACCTTGATCTCGGTGACAATTCTTTCTCTGGTGGAGTAGTGCCTTCAGATTTGAAAGGGTTGAGGAACTTGCAGAGAATGATGCTCGGGAATAGTATGCTTGGCGGACCACTGCCTGGGAATTTGTTTGGTACTTCATCGCAGTTGCGTTCTGTAGTGCTGAGACAAAACAATTTTACTGGTTCTTTGCCTCTTGAGTTGTGGTCACTGCCAAAGTTGACTTTCCTTGATGCATCCGCCAATAACTTTGGTGGTTTGCTTCCTAATTCGAATTCTTCAGCTAACGGCACTATTGCAGTGCTTAATATTTCTCATAACGTGTTCTATGGAAACCTCACTCATGTACTTGGAAGGTTCGGGTTTGTGGATCTGTCAAACAATTATTTTGAGGGAAGGGTTCTTAATTTCATACATAATGCATCTTTAGCTAGCAACTGCCTTCAAAACACGACAAATCAGAAGACTACAGTGGATTGTGCATCATTTTATGCTGCAAGGGGCCTCACTTTTGATAATTTTGGACGCCCAAATGCGACAAATCCCCGCACATCAGAAGGGTCTGGGGAGAGCAATAAAACTAAGATTATATTGGCAGCAGTCTTAGGCGGACTAGGTTTAATCGCATGTTTGGTGTTGCTGGTGGTATTATTGCTTCTGTGCGCTCGTAAGCGGGGTAATTCAAGTCAGAGGGGAAACGGTGTGGGCCCTGCTCCTGCCGGAGGCAGCCCTCCACATCCTACTGATGCATCAATTAACTTTTCAAATGTAGGAGAGTCATTTACTTATCTTCACTTGCTCCAAGCCACAGGAGATTTCAATGATGCAAATCTTATCAAACACGGTCACTCGGGGGATTTATTCAAAGGTGTTTTGGATAGTGGAATTCCTGTTGTCATCAAAAGGATCGACATGCGTTCAACTAAAAAGGATGCTTACCTATTGGAATTGGAATTTTTCAGCAAGGTTTCTCATCAAAGATTTGTCCCCCTATTGGGCCATTGTTTAGAAAATGAGAATGAGAAGTTTCTGGTTTATAAAAATATACCAAACGGGGACTTGTCCAATTGCTTATACTTCAAAAAAACCACACCTGAAGATGGTACTTTGCAGTCATTAGATTGGATAACTAGGTTGAAAATTGCTACTGGAGCAGCCGAGGCACTATCGTATCTACATCACGAATGTATTCCACCCCATGTTCACAGGGATGTTCAAGCAAGTAGTATACTTCTAGATGATAAATATGAAGTTCGATTAGGGAGTCTAAGCGAAGTCTGTGTTCAAGAAGGCGATTCTCATCAAAGTAGAAGACTCCGATTTCTTCTGTTGCCTCAGTCCTCTGATCCAAGCTCATCTGGTTCATCAACATCAGTTTGTGCCTATGATGTGTATTGCTTCGGGAAAGTGTTACTTGGGCTGGTGACTGGTAAACTCGGACTCAGTGCGTCAAGTGACGGTGATGTAAAGGAATGGTTGGATCAAGTTCTACCTAACATTACTATGTATGACAAGGATCTCGTGACAAAAATTGTCGATCCATCTCTGTTTCTTGACGAGGATTTCTTAGAGGAAGTGTGGGCAATAGCCATTGTTGCCAGGTCTTGCCTTAATCCCAAACCTGCGAAACGACCCCCAATGAGATACGTCCTCAAGGCTTTGGAAAACCCTTTAAAAGTTGTCAGGGAAGAAAGCTCGAGCTCGGCAAGGCTTAGAGCAACCTCATCTAGAGGCTCTTGGAATGCTACTTTGTTCGGTAGTTGGCGTCATAGTTCATCCGATGCTGCAACAGTAGTAATTCCACCATCCTCTGGTCCATCAAAAGTAGAAGGAACTAGTAGTTTAAAGCTTTCAGGAACACCAGGCTCACAATCACCGCGTAGTTTCCACGACGGTGGTGATGGCATTTCATCATCGCAAAGACGTTACTCGAAGGAAATATTTTCGAAGCCGTCCGGCTTACATGATGTAGAGAGGGTGGATCAGGAATAG 2748 0.4381 MLDRRSIVLLSFWSLLFLFLSLFQLTLEQNIEKLSSPTERVALLQLRGSLGLRSREWPIKPDPCLFWVGITCHNGSVVGINISGFRRTRLGRRNPQFAVDALANFTFLQSFNASNFMLPGPIPDWFGLRLGSLRVLDLRSCSIVGAIPGSVGNLTSLTNLYLSDNKLTGTVPDSIGQLLALSVLDLSQNSLTGSIPTSLTVLVNLSSLDMSSNFLSGPIPPGIGGLSKLQYLNLSSNDLTSLPSQIGGLGSLVDLDLGDNSFSGGVVPSDLKGLRNLQRMMLGNSMLGGPLPGNLFGTSSQLRSVVLRQNNFTGSLPLELWSLPKLTFLDASANNFGGLLPNSNSSANGTIAVLNISHNVFYGNLTHVLGRFGFVDLSNNYFEGRVLNFIHNASLASNCLQNTTNQKTTVDCASFYAARGLTFDNFGRPNATNPRTSEGSGESNKTKIILAAVLGGLGLIACLVLLVVLLLLCARKRGNSSQRGNGVGPAPAGGSPPHPTDASINFSNVGESFTYLHLLQATGDFNDANLIKHGHSGDLFKGVLDSGIPVVIKRIDMRSTKKDAYLLELEFFSKVSHQRFVPLLGHCLENENEKFLVYKNIPNGDLSNCLYFKKTTPEDGTLQSLDWITRLKIATGAAEALSYLHHECIPPHVHRDVQASSILLDDKYEVRLGSLSEVCVQEGDSHQSRRLRFLLLPQSSDPSSSGSSTSVCAYDVYCFGKVLLGLVTGKLGLSASSDGDVKEWLDQVLPNITMYDKDLVTKIVDPSLFLDEDFLEEVWAIAIVARSCLNPKPAKRPPMRYVLKALENPLKVVREESSSSARLRATSSRGSWNATLFGSWRHSSSDAATVVIPPSSGPSKVEGTSSLKLSGTPGSQSPRSFHDGGDGISSSQRRYSKEIFSKPSGLHDVERVDQE* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1337 915 PANTHER RECEPTOR-LIKE PROTEIN 55 12 193 - -
Lan3g1337 915 PANTHER RECEPTOR-LIKE PROTEIN 55 191 848 - -
Lan3g1337 915 Pfam Protein tyrosine and serine/threonine kinase 531 749 IPR001245 GO:0004672|GO:0006468
Lan3g1337 915 Gene3D Ribonuclease Inhibitor 199 424 IPR032675 -
Lan3g1337 915 SUPERFAMILY Protein kinase-like (PK-like) 502 806 IPR011009 -
Lan3g1337 915 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Lan3g1337 915 Gene3D Ribonuclease Inhibitor 36 198 IPR032675 -
Lan3g1337 915 Gene3D Transferase(Phosphotransferase) domain 1 601 828 - -
Lan3g1337 915 MobiDBLite consensus disorder prediction 848 898 - -
Lan3g1337 915 PRINTS Leucine-rich repeat signature 181 194 - -
Lan3g1337 915 PRINTS Leucine-rich repeat signature 226 239 - -
Lan3g1337 915 MobiDBLite consensus disorder prediction 479 501 - -
Lan3g1337 915 SUPERFAMILY RNI-like 99 393 - -
Lan3g1337 915 Gene3D Phosphorylase Kinase; domain 1 498 599 - -
Lan3g1337 915 ProSiteProfiles Protein kinase domain profile. 525 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1337 915 PANTHER BNAA07G03560D PROTEIN 12 193 - -
Lan3g1337 915 PANTHER BNAA07G03560D PROTEIN 191 848 - -
Lan3g1337 915 SMART LRR_typ_2 154 178 IPR003591 -
Lan3g1337 915 SMART LRR_typ_2 202 225 IPR003591 -
Lan3g1337 915 SMART LRR_typ_2 226 249 IPR003591 -
Lan3g1337 915 SMART LRR_typ_2 323 346 IPR003591 -
Lan3g1337 915 MobiDBLite consensus disorder prediction 900 915 - -
Lan3g1337 915 Pfam Leucine Rich Repeat 228 244 IPR001611 GO:0005515
Lan3g1337 915 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Lan3g1337 915 MobiDBLite consensus disorder prediction 848 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1337 Lan-Chr3 25174687 25187968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1337 38 698 Miscellaneous Gene Families AT2G16250 57.121 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lan3g1337 PK_Tyr_Ser-Thr 3.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1337 - - lang:109344030 1660.58