Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1327 ATGGCAAATCAAGGGATTCAACTAATGAACTCTCCATTCGGTGACACAACTTATACGAAGGTATTCGTTGGAGGATTGGCTTGGGAAACTCAAAGCGAAACCATGCGCCATTACTTTGAACAATTTGGTGATATTCTAGAAGCTGTTGTTATCACTGATAAGAATACTGGTCGATCCAAAGGCTATGGTTTTGTGACTTTCCAGGATCCTGATGCTGCTATGAGGGCTTGTGCTGACCCAGCTCCGGTTATTGATGGTCGAAGGGCTAATTGTAATTTGGCTTCACTTGGTCGACCGCGACCTCCTATGCCTTATGGACGGATAAGATCAGCCTCTCCTTATGTTGGAAGTTTGCAACCAACTCGTGGTGCATATGCTGGAGGTTATGGCTACCAGCAACCAGTTTCCTACAACTATCAGCAAGGATTGGCTTATCCTCCTTATGGGTATACGGCATATGGACCTGAGTACATTTACCCACAGAGTGTGTACAACCCTTACACAGGCCAACATTACCTTCAGATATATGGAGTGCCTGGGGCAGTGAACACAACAGTGTATCCTTATGGACAAATGGGTCGGGCTATTCCTAGCGATCATGGTTATACAGCAATGCAGGGCTACACAATACCTGGTCATCAGATAGTGCCCTATGGTGGGCCGAATGTTAATGCTATAACAGCTTCACTCGTGCCTGCCATCCAAGCACCATACCCTAGTGGAATTGCTGCACCAGTTCCAGGCCAACCACAATTTGTTGTTCCCGCTCCTTCTCAGTTTATGCAAGGTAGCGGTCCTGACCAAACAGCCGGGTGA 816 0.4706 MANQGIQLMNSPFGDTTYTKVFVGGLAWETQSETMRHYFEQFGDILEAVVITDKNTGRSKGYGFVTFQDPDAAMRACADPAPVIDGRRANCNLASLGRPRPPMPYGRIRSASPYVGSLQPTRGAYAGGYGYQQPVSYNYQQGLAYPPYGYTAYGPEYIYPQSVYNPYTGQHYLQIYGVPGAVNTTVYPYGQMGRAIPSDHGYTAMQGYTIPGHQIVPYGGPNVNAITASLVPAIQAPYPSGIAAPVPGQPQFVVPAPSQFMQGSGPDQTAG* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1327 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 77 IPR000504 GO:0003723
Lan3g1327 271 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 3 267 - -
Lan3g1327 271 PANTHER BOULE-RELATED 3 267 IPR037366 GO:0003729
Lan3g1327 271 Gene3D - 3 110 IPR012677 -
Lan3g1327 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 96 IPR000504 GO:0003723
Lan3g1327 271 CDD RRM_RBM24_RBM38_like 19 94 - -
Lan3g1327 271 SUPERFAMILY RNA-binding domain, RBD 11 114 IPR035979 GO:0003676
Lan3g1327 271 SMART rrm1_1 20 92 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1327 Lan-Chr3 25110636 25114589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1327 8 95 C2H2 Transcription Factor Family AT2G19380 39.773 3.68e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1327 - - gmx:100782606 478.018