Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1323 ATGATGATGTTATCAATGGAAGGTGTGTTGAGTGAGCTTAGTGATTATGAAAAGAGGAATGAACAAGGTTTACCACCTGGTTTTAGGTTTCACCCTACAGATGAAGAACTTTTAACTTTTTATCTTGCTTCAAAGGTCTTTAATGGAACCTTCACTACTCATCTCAACTTTGCTGAGGTTGATCTCAATAGATGTGAGCCATGGGAACTTCCAGAAGTTGCAAAAATGGGGGAGAGAGAGTGGTATCTATTGAGCATGAGGGACAGAAAATACCCAACAGGGTTAAGAACAAATAGAGCAACTGGTGCAGGGTACTGGAAGGCCACTGGTAAGGACAAAGAAGTGTACAATGCTTCAAGTGGTGCCCTACTTGGAATGAAAAAGACCCTTGTTTTCTACACTGGAAGGGCCCCACGTGGTGAAAAGACCAAATGGGTCATGCATGAATATCGTTTAGATGCTCATTTTTCCATTCATTCTCACCCTCCTAACACATTTAACTCTAAGGAGGAATGGGTGATATGCAGAATATTTCATAAATCTGGGGAAAAGAAAACTCATGTGCTCCAAATCCAAGGAAATTTGGATGCATCTTCAAAAAGTTCTTTACCTCCATTTCATACAACTCCACCTTTCTTTACACAATTCCAAAATGACCTCTCCAACTCTAACCTTTTCCCATTCCACCCTTTTGCTCCCACTAATGCAATCACCAACAACACAAACCATGATGCCCTAAATTCCTGCACCCTTAAGGTCATCAAGGAACATATAAACCTTCCTAAATCAACCAAAACAGAAGATACATTCTACCCATACCAACTACTTCATGACACTAACATGTTGAGCAACACAAACTCAAGTAATTTCCAAAGCTCCTTGCCTCTTAATATGAATGATAGTGGCCTAATGATGGGGTTCTCAGGAGCTGAAGATGCTGAATTAAGGGACATGATGATGTCTACTTCAATACCTTTCAATAAACAAAGCTTGCAGCAGATAATGCTAGATTCTCCTATTGCAATAGATTCTTGGCCTTTGCCCCAACATGTTTAA 1056 0.4006 MMMLSMEGVLSELSDYEKRNEQGLPPGFRFHPTDEELLTFYLASKVFNGTFTTHLNFAEVDLNRCEPWELPEVAKMGEREWYLLSMRDRKYPTGLRTNRATGAGYWKATGKDKEVYNASSGALLGMKKTLVFYTGRAPRGEKTKWVMHEYRLDAHFSIHSHPPNTFNSKEEWVICRIFHKSGEKKTHVLQIQGNLDASSKSSLPPFHTTPPFFTQFQNDLSNSNLFPFHPFAPTNAITNNTNHDALNSCTLKVIKEHINLPKSTKTEDTFYPYQLLHDTNMLSNTNSSNFQSSLPLNMNDSGLMMGFSGAEDAELRDMMMSTSIPFNKQSLQQIMLDSPIAIDSWPLPQHV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1323 351 SUPERFAMILY NAC domain 19 180 IPR036093 GO:0003677|GO:0006355
Lan3g1323 351 Gene3D NAC domain 33 185 IPR036093 GO:0003677|GO:0006355
Lan3g1323 351 ProSiteProfiles NAC domain profile. 24 180 IPR003441 GO:0003677|GO:0006355
Lan3g1323 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 15 286 - -
Lan3g1323 351 Pfam No apical meristem (NAM) protein 25 152 IPR003441 GO:0003677|GO:0006355
Lan3g1323 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1323 Lan-Chr3 25094659 25096935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1323 2 185 NAC Transcription Factor Family AT1G76420 71.739 4.08e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan3g1323 NAM 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1323 - - gmx:100808967 404.831