Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1320 ATGACTCGTCTTTTTAGATTTTTAACCGACAACCACCCTTCTCCTCCATCCTCCGTCGTCGACTCCGATTACGTCGTCATTCTCGCCGCCCTCCTCTGTGCTCTCATCTGCGTCCTCGGCCTCCTCGCCGTCGCTCGCTGCACCTGTCTCCGTATCTCCTCCACCGCCTCCACTCCCCAACCTCCTCCTCTCCCTTCATCCAACAAAGGCGTCAACAAGAAGGTCCTCCGCTCCCTTCCCAAACTCACCGCCACCGCCGAATATGCTGTCAAATTATCCGATTGCGCTATCTGCCTGACTGAATTCGCTGCCGGCGAGGAGATTCGAGTGCTTCCTCACTGCGGCCATGGATTCCACGTCACCTGCATCGACACGTGGCTCAAATCGAATTCTTCTTGTCCGTCGTGCCGTCAGGTTCTGACGGTTTCACGGTGCCAGAAGTGCGGCGGTTTCCCTGCATCCACCAGCTCTAGCTCCAATTCCGCCGCCGCATCGGAAACGGATCCTGAGGCGAGATCGAAGGTTATGGAAAGAGAGAACGATGGTAATAGGTTCCTTCCTTAG 564 0.5621 MTRLFRFLTDNHPSPPSSVVDSDYVVILAALLCALICVLGLLAVARCTCLRISSTASTPQPPPLPSSNKGVNKKVLRSLPKLTATAEYAVKLSDCAICLTEFAAGEEIRVLPHCGHGFHVTCIDTWLKSNSSCPSCRQVLTVSRCQKCGGFPASTSSSSNSAAASETDPEARSKVMERENDGNRFLP* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1320 187 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 174 - -
Lan3g1320 187 MobiDBLite consensus disorder prediction 170 187 - -
Lan3g1320 187 MobiDBLite consensus disorder prediction 151 187 - -
Lan3g1320 187 Pfam Ring finger domain 94 137 IPR001841 -
Lan3g1320 187 PANTHER RING-H2 FINGER PROTEIN ATL8 1 174 - -
Lan3g1320 187 SMART ring_2 95 136 IPR001841 -
Lan3g1320 187 SMART FANCL_C_2 91 145 - -
Lan3g1320 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 142 IPR013083 -
Lan3g1320 187 CDD RING-H2_PA-TM-RING 94 137 - -
Lan3g1320 187 SUPERFAMILY RING/U-box 78 143 - -
Lan3g1320 187 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Lan3g1320 187 MobiDBLite consensus disorder prediction 151 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1320 Lan-Chr3 25080889 25081654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1320 4 187 C3H Transcription Factor Family AT1G20823 53.769 4.99e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1320 - - lang:109328101 259.61