Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1315 ATGAATTTGTGTTGGGTTTTATGTTGGGTTGTGTTTTTGAGAGTATCACTATTTCCCTATGTGGCTGCAACAAATGTTTCTTCTTCTTCTTCAAGACCTGCCATTGTGAACATTGGAGCTATCTTCACCTTTGATTCCACTATTGGGAAAGTGGCTAAAATTGCAATGGAGGAAGCAGTGAAGGATGTCAACGCCGATTCCAGCGTTCTTCGTGGATCTAAACTTGTTCTCAGTTTGCAAAACTCCAATTGTAGTGGTTTCCTAGGAATGATTCAAGCTTTGAGGTTCATGGAGACTGATGTAATAGCTATAATAGGTCCACAATCTTCGGTAGTTGCACACATTATATCCCATGTTGCGAATGAGCTCAAGGTTCCTTTATTGTCATTTGCTGCAACAGACCCAACCCTCTCATCGTTGCAATTCCCTTTCTTTGTAAGGACCACGCAGAGTGATTTTTACCAAATGGCTGCAGTTGCTGAAATTATTGATTATTATGGTTGGAAGGAAGTCATTGCAATTTACGTAGATGATGATTACGGACGAAATGGTGTGTCTGCATTAGATGATCAACTTGCGGGTAGGCGCTGTAGAATCTCTTACAAAGTTGGATTTAACTCGGGAGTTAGCCGAGGAGAAATCACTGATTTGCTTGTCAGGGTGGCGCTTTTGCAATCTCGTGTCATTGTTCTACATGTAAACCCTGATTCCGGATTCACGATCTTTAATGTCGCACGTTATCTCGGGATGACGGGGAATGGATATGTCTGGATAGCCACGGACTGGCTCTCCGCTGTTCTGGATTCTTCTTCTCTCCCTTCGGAGACGATGGATCTTCTGCAAGGAGTAGTTGTTTTGCGCCACCACACACCTGATTCTGATAGAAAAAGAGCATTTTTGTCGAGGTGGAAAAAGTTAACCGGTCACTCCTTGGGTTTACATTCTTATGGCCTCTATGCATATGATTCTGTTTGGCTTGTCGCGCGGGCTATTGATAAATTTTTCGATCAGGGTGGGATCATTTCCTGTACCAATATCACATGGTTACACGATGCTAAGGGAGGTGGTCTTAACCTTGATGCTATGAGTGTTTTTGATAATGGAACACTTCTGTTGAAGAACATAATGATGAGTGATTTTGTAGGATTAACAGGTCCTGTGAAATTTGCACCAGACAAATCTCTTGTTCATCCTGCGTATGATATTATGAATGTAGCTGGAACTGGCTTTCGTCGGGTCGGTTACTGGTCCAACTACTCTGGTCTGTCAATTCTACCTCCTGAGACATTGTATGCTAAGCCACCAAATAGATCAAGTGCAAACCAGCAACTTAACAGTGTAATATGGCCCGGAGAAACAGTATCCAAACCCCGTGGATGGGTCTTCCCAAATAATGGAAAACAATTGAGAATCGGTGTGCCTATCCGGGTCAGTTACCGCGAATTTGTATCGCCAATTCCTGGAACAGATATGTTTAAAGGGTTCTGCATTGATGTATTCACATCAGCTGTAAACTTGTTACCATATGCTGTTCCTTACCACTTTGTCCCATTTGGAGATGGTAAAAATAATCCGAGTTATACAGAAATTGTCACTTCAATTTCCACCGGGTACTTGGATGGTGCTATTGGTGACATTGCCATTGTCACTAATCGGACAAAGATTGTCGATTTTACTCAACCATATGCTGCATCTGGACTTGTTGTTGTGGCCCCTTTCAAGAAAACGAACTCCGGCGGTTGGTCATTCCTGCAACCATTCACTCCTCTTATGTGGATTGTGACAGCCTCTTTCTTCTTTTTTATTGGAATAGTTGTATGGATTTTGGAACACAGAATAAATGATGAGTTCAGGGGCCCACCTAAACAACAACTTATAACAATTTTATGGTTTAGCCTTTCAACTCTATTCTTTTCTCACAGAGAAAATACGATGAGCACTCTAGGTCGGTTCGTGTTACTGATATGGATGTTTGTGGTATTGATCATCAACTCTAGCTACACTGCAAGTTTAACATCGATACTCACAGTGCAACAGTTATCTTCTCCTATCAGCGGAATAGATAGCTTAAAAGCTAGCAACGAACCGATAGGGTTCCAAGTAGGTTCATTCGCAGAACATTATCTGAAGGAGGATATTGGAATATCCAAATCTAGGCTAGTTCCGCTTGGATCTCTGGAAGAGTATGCTAATGCACTTCAGCTTGGGCCCGGTAAAGGAGGCGTTGCTGCTATTGTCGATGAACGGCCCTATGTTGAAATCTTCTTATCAACTCAGTGCACATTCAGGGTTGTAGGCCAGGAGTTCACTAGAAGTGGCTGGGGTTTTGCATTCCCTCGGGACTCTCCTTTGGCTGTGGATTTGTCAACTGCCATTCTACAACTTTCTGAAACCGGTGATCTGCAGCGCATTCATGACAAATGGATGACACGAAGCACGTGTAGTTTAGACGATGATGAAATTGATGCGGATCGGCTCAAGCTTCAAAGTTTCTGGGGTCTTTTTCTCATTTGCGGGATAGCTTGCTTTATTGCTCTTGTCATATACTTTTTGCAGATTATGGTCCAGTTAAGGCTTTCTGATCCTGCTCATGCTGCTGCTAATGTTAACTCAATTTCGGGTCGTTTTCAAAGATTTCTTTCACTAATTGATGAGAAGAAAGATCCTTCAAAGAAGGATAATAGAAGAAAGAGAAATGGAGAGGAAATATCATATGAAGATCAAATAGAGAGGCAGCCAAAGAGGATACAAACAGAAATAACAGCTGAGTTCAACTCAAAAAATTAA 2787 0.4205 MNLCWVLCWVVFLRVSLFPYVAATNVSSSSSRPAIVNIGAIFTFDSTIGKVAKIAMEEAVKDVNADSSVLRGSKLVLSLQNSNCSGFLGMIQALRFMETDVIAIIGPQSSVVAHIISHVANELKVPLLSFAATDPTLSSLQFPFFVRTTQSDFYQMAAVAEIIDYYGWKEVIAIYVDDDYGRNGVSALDDQLAGRRCRISYKVGFNSGVSRGEITDLLVRVALLQSRVIVLHVNPDSGFTIFNVARYLGMTGNGYVWIATDWLSAVLDSSSLPSETMDLLQGVVVLRHHTPDSDRKRAFLSRWKKLTGHSLGLHSYGLYAYDSVWLVARAIDKFFDQGGIISCTNITWLHDAKGGGLNLDAMSVFDNGTLLLKNIMMSDFVGLTGPVKFAPDKSLVHPAYDIMNVAGTGFRRVGYWSNYSGLSILPPETLYAKPPNRSSANQQLNSVIWPGETVSKPRGWVFPNNGKQLRIGVPIRVSYREFVSPIPGTDMFKGFCIDVFTSAVNLLPYAVPYHFVPFGDGKNNPSYTEIVTSISTGYLDGAIGDIAIVTNRTKIVDFTQPYAASGLVVVAPFKKTNSGGWSFLQPFTPLMWIVTASFFFFIGIVVWILEHRINDEFRGPPKQQLITILWFSLSTLFFSHRENTMSTLGRFVLLIWMFVVLIINSSYTASLTSILTVQQLSSPISGIDSLKASNEPIGFQVGSFAEHYLKEDIGISKSRLVPLGSLEEYANALQLGPGKGGVAAIVDERPYVEIFLSTQCTFRVVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSETGDLQRIHDKWMTRSTCSLDDDEIDADRLKLQSFWGLFLICGIACFIALVIYFLQIMVQLRLSDPAHAAANVNSISGRFQRFLSLIDEKKDPSKKDNRRKRNGEEISYEDQIERQPKRIQTEITAEFNSKN* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1315 928 PIRSF IGluLR_plant 4 928 IPR017103 -
Lan3g1315 928 Gene3D - 757 816 - -
Lan3g1315 928 CDD PBP1_GABAb_receptor_plant 37 423 IPR044440 -
Lan3g1315 928 Gene3D - 151 422 - -
Lan3g1315 928 PANTHER GLUTAMATE RECEPTOR 3.3 23 921 - -
Lan3g1315 928 Gene3D - 54 397 - -
Lan3g1315 928 Pfam Bacterial extracellular solute-binding proteins, family 3 492 810 IPR001638 -
Lan3g1315 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 921 - -
Lan3g1315 928 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 49 65 - -
Lan3g1315 928 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 109 137 - -
Lan3g1315 928 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 320 332 - -
Lan3g1315 928 Pfam Receptor family ligand binding region 54 407 IPR001828 -
Lan3g1315 928 Pfam Ligand-gated ion channel 811 842 IPR001320 GO:0015276|GO:0016020
Lan3g1315 928 CDD GluR_Plant 467 808 - -
Lan3g1315 928 Gene3D - 464 579 - -
Lan3g1315 928 SMART GluR_14 470 811 IPR001320 GO:0015276|GO:0016020
Lan3g1315 928 PRINTS Metabotropic glutamate GPCR signature 104 130 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lan3g1315 928 PRINTS Metabotropic glutamate GPCR signature 136 155 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lan3g1315 928 PRINTS Metabotropic glutamate GPCR signature 155 171 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lan3g1315 928 PRINTS Metabotropic glutamate GPCR signature 171 188 IPR000337 GO:0004930|GO:0007186|GO:0016021
Lan3g1315 928 SUPERFAMILY Periplasmic binding protein-like I 31 461 IPR028082 -
Lan3g1315 928 MobiDBLite consensus disorder prediction 887 909 - -
Lan3g1315 928 Gene3D - 580 711 - -
Lan3g1315 928 SUPERFAMILY Periplasmic binding protein-like II 446 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1315 Lan-Chr3 25052837 25057071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1315 1 900 Ion Channels AT1G42540 63.934 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1315 K05387 - gmx:100777478 1521.52