Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1312 ATGGAAACAAAGCAAGAGATAGAGAACAAGAACACAAGTAATAGTAATATTAATAGTAATGGAATTGGAGGAAGCAAGAACTTGTATATGAAAGTAATGAGTGATGAACAAATGGAACAACTTAGGCAACAAATATCTGTGTATACCACTATTTGTGATCAACTTGTTCAGATGCATAACTCCATCACTTCTCAACAAGACCTTGTTGGACTGAGACTAGGTAGTTTATATTGTGATCCAATGATGGCATGTTCTGGACACAAGATAAGTGCAAGACAACGTTGGACTCCAACACCACTTCAGCTTCAATTGTTGGAACGTATTTTTGATGAAGGAAATGGAACTCCAACCAAACAGAAAATCAAAGACATAACCAATGAACTTGGACAACATGGTCCAATATCTGAGACAAATGTTTATAATTGGTTTCAGAATAGAAGAGCACGTTCTAAAAGGAAACAACTAGCTCCTACATCAAATAATAATAATACTAGTAGTGCAGAACCTGAAGCAGAAACAGAAGTTGAATCTCCAAAAGAAAAGAAGACAAGACCTGAAAGCTTTCAACTTCAACCTTATGACTATGAGAATTCATCACCACATTCATTGTACATTCATAGTCCTGACATAGGATTTGACCAACTGATGAGTAAAATAGAAGTTTCAGGCTGCTACAGTTCTTATTTTCTTTGA 693 0.355 METKQEIENKNTSNSNINSNGIGGSKNLYMKVMSDEQMEQLRQQISVYTTICDQLVQMHNSITSQQDLVGLRLGSLYCDPMMACSGHKISARQRWTPTPLQLQLLERIFDEGNGTPTKQKIKDITNELGQHGPISETNVYNWFQNRRARSKRKQLAPTSNNNNTSSAEPEAETEVESPKEKKTRPESFQLQPYDYENSSPHSLYIHSPDIGFDQLMSKIEVSGCYSSYFL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1312 230 MobiDBLite consensus disorder prediction 154 171 - -
Lan3g1312 230 Gene3D - 93 157 - -
Lan3g1312 230 CDD homeodomain 92 154 IPR001356 GO:0003677
Lan3g1312 230 ProSiteProfiles 'Homeobox' domain profile. 88 153 IPR001356 GO:0003677
Lan3g1312 230 SUPERFAMILY Homeodomain-like 91 154 IPR009057 -
Lan3g1312 230 MobiDBLite consensus disorder prediction 1 21 - -
Lan3g1312 230 MobiDBLite consensus disorder prediction 172 187 - -
Lan3g1312 230 Pfam Homeodomain 92 152 IPR001356 GO:0003677
Lan3g1312 230 PANTHER WUSCHEL-RELATED HOMEOBOX 13 22 230 IPR044559 GO:0003700
Lan3g1312 230 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 22 230 - -
Lan3g1312 230 MobiDBLite consensus disorder prediction 150 195 - -
Lan3g1312 230 SMART HOX_1 90 157 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1312 Lan-Chr3 25023629 25025802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1312 28 213 Wox Gene Family AT4G35550 56.000 2.42e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan3g1312 Homeodomain 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1312 - - pvu:PHAVU_009G012200g 322.398