Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1307 ATGAGTTGCTTCTCTTGCATTTGTTCTCGTCGTAAAGATGTTAGTAGAATCCAAATTGACAAGGCTTCTCGATCTGCTTCTTCAGAGGGTGAAAGGAAGAAGGAATACTCAAATGTGAAGAGAAGTACAGCAGCAGCAGCTAGTTTTGGATTCAGGGAGTTAGCAGAAGCAACAAAGGGTTTCAAAGAAGTGAACTTGATTGGTGAAGGAGGTTTTGGAAGGGTTTATAAGGGTCGTCTCTCTAACGGGGAGATTGTTGCCATAAAACAATTGAGTCTTGATGGTCATCAAGGTTTTCAGGAATTTGTCACTGAGGTTCTTATGTTAAGCCTATTACACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTACGAATACATGCCTATGGGATCCCTAGAAGATCATCTTTTCGATAATAACCAAGGAAAAGAGCCATTAAGTTGGAATGTTCGGATGAAAATTGCTGTTGGGGCTGCTCGGGGCCTTGAGTATCTCCACTGTAAAGCTGATCCGCCTGTTATTTATCGAGACTTGAAATCAGCGAACATCTTATTAGATAATGAATTCAGCCCAAAACTGTCAGATTTTGGGCTTGCCAAACTTGGTCCTGTTGGAGACAAGACCCATGTTTCAACCAGAGTGATGGGAACATATGGATACTGTGCGCCAGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCAGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACCGGACGTAGGGCAATAGATGGAAGTAGAAAACCCGGGGAGCAAAACTTAGTTTCATGGTCTCGTCCATTTTTCAGCGACCGGAGAAAGATTACGCTAATGGCTGACCCTCTTTTGCGTGGAAACTTCCCAGTGCGCTGTTTGCATCAGGCGATTGCTATAACTGCAATGTGTCTCCAGGAGCAACCAAAAGTTCGTCCACTTGTTGGTGATATTGTTGTTGCGCTGGAGTACCTAGCTTCTCAGAGTAATACACGTGATGTTCATAGACATGGTGTGCGCAACGCACAGCCGCAGCCTTCAGAAATAGACAGAAATTAA 1095 0.432 MSCFSCICSRRKDVSRIQIDKASRSASSEGERKKEYSNVKRSTAAAASFGFRELAEATKGFKEVNLIGEGGFGRVYKGRLSNGEIVAIKQLSLDGHQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDNNQGKEPLSWNVRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFSPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDGSRKPGEQNLVSWSRPFFSDRRKITLMADPLLRGNFPVRCLHQAIAITAMCLQEQPKVRPLVGDIVVALEYLASQSNTRDVHRHGVRNAQPQPSEIDRN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1307 364 Pfam Protein kinase domain 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1307 364 Gene3D Transferase(Phosphotransferase) domain 1 137 356 - -
Lan3g1307 364 Gene3D Phosphorylase Kinase; domain 1 21 136 - -
Lan3g1307 364 SUPERFAMILY Protein kinase-like (PK-like) 37 335 IPR011009 -
Lan3g1307 364 SMART serkin_6 61 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1307 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lan3g1307 364 ProSiteProfiles Protein kinase domain profile. 61 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1307 364 PANTHER OS07G0668900 PROTEIN 27 350 - -
Lan3g1307 364 CDD STKc_IRAK 67 335 - -
Lan3g1307 364 ProSitePatterns Protein kinases ATP-binding region signature. 67 89 IPR017441 GO:0005524
Lan3g1307 364 PANTHER OS07G0668900 PROTEIN 27 350 - -
Lan3g1307 364 MobiDBLite consensus disorder prediction 345 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1307 Lan-Chr3 25002771 25006131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1307 1 360 Glycoside Hydrolase AT3G07070 57.520 1.68e-147 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan3g1307 Pkinase 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1307 - - gmx:100796595 572.392