Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1295 ATGAGTAGAAAGTTGAATGCTTACAGAGTTCTATTTGATGAGAATGGTGACCCCAGGTTTTCGTGTTTTGGGTTGATTAAGAACAGCAGGGACGGGAAAAGTTACAGCACAAATCTTGCTTATGCACCTCCCGAGTATCTGAGAAATGGTAGGGTGACTCCAGAAAGTGTTATCTTCAGTTTTGGGACTGTATTATTGGATCTTCTTAGTGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATAAAGGGTAGAAATATTCAACTCCTCATGGATTCACATTTGGAGGGGAACTTCTCAACAGAAGAGGCAACTGTGTTTTTTGATCTTGCCTCACAATGTTTACAGTATGAATATGAATCATCACCCAGAGTAACACTATTGACACAACCAAAAATAAATGCAAAAATGTGA 417 0.3957 MSRKLNAYRVLFDENGDPRFSCFGLIKNSRDGKSYSTNLAYAPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIKGRNIQLLMDSHLEGNFSTEEATVFFDLASQCLQYEYESSPRVTLLTQPKINAKM* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1295 138 Pfam Protein kinase domain 10 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1295 138 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1295 138 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATED 4 126 - -
Lan3g1295 138 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Lan3g1295 138 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 4 126 IPR045845 GO:0004672|GO:0009742
Lan3g1295 138 SUPERFAMILY Protein kinase-like (PK-like) 3 125 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1295 Lan-Chr3 24931605 24933288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1295 1 131 Receptor kinase-like Gene Family AT3G58690 30.872 2.53e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan3g1295 Pkinase 8.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1295 K14500 - lang:109342457 280.411