Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1288 ATGGGTGGTGATAGCAAATCGGAGAACGCCGTGTATCTTCACGGCACCTTGGATTTGAATATCGTGGAGGCTCGTTTTCTACCGAACATGGACATGTTTTCGGAGCGGTTTCGTAGATTCTTCTCTGCTCTAAATACGTGTAGCGCTTCGTTTACCGGAAAAAGGAGGAACCGTAGTCGCCGGAAAAAACGCAAGATTATAACGAGTGATCCATACGTCACCGTTTGTCTCTCCGGTGCCACCGTGGCACGCACACGTGTCATATCTAATTCTCAGAATCCTACGTGGAATGAGCATTTCAATATCTCTCTGGCTCACCCAGCCTCTCAGGTTGAATTCTACGTCAAGGACAATGACATGTTCGGCGCTGATTTGATCGGAGTTGTAACCATCTCTGCCGAGAGGATCCTCACCGGAAAAACTCTTTCCGACTGGTTTCCGATTATCGGTTCATTCGGTAAACCGCCGAAACCGGATTGCGCAATTTGGCTTGAAATGAAGTTCACTAGATGTGAGGATAGTCCTATCTACAAAAACATCGTGGATCCAGATCGTTTTGCGGTTCGGGATTCGTATTTTCCGGTTCGGCATGGAGGTTCGGTGACGCTGTATCAGGACGCGCATGTTCCGGATTCGATGTTACCGGAGATTGAATTGGATGAAGGGGTTGTGTTTGAACAAGGGAAATGTTGGGAAGATATGTGTCATGCAATTTTGGAAGCGCATCATTTGGTATACATTGTAGGTTGGTCAATTTATCATAAGGTGAAATTGGTGAGAGAACCAACAAAGCCATTGCCTAGTGGTGGGAATTTGAGTTTGGGGGATTTGCTCAAATACAAATCACAAGAAGGTGTACGAGTTTTGCTCTTGGTTTGGGATGATAAAACTTCTCACAGTAAATTTGGAATTAACACTACTGGAGTAATGCAAACTCATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTAATTGTGTGCTGTCACCTCGATATGCGAGCAGTAAGCTTAGCATTTTCAAGCAGCAGGTTGTTGGAACCCTCTTCACGCATCATCAGAAATGTGTGATTGTGGATACTCAAGGGCATGGCAACAATAGGAAGATAACCACATTTATAGGTGGCCTTGATCTATGTGATGGCCGGTATGATACACCTGAGCATAGAATTTTTCGTGATCTTGACACTATTTATGAGGATGATTATCACAATCCCACGTTTTCTGCTGGAACCAAGGGTCCGAGGCAAGCATGGCATGATTTACACTGCAAAATTGAGGGCCCTGCTGCATATGATATACTCACTAATTTTGAGCAGCGCTGGAAAAGAGCTTCCAAATGGTCTGAGTTGGGTCAAAGGTTCAAAAGAGTATCTCACTGGCATGATGATTCCTTGATTAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGAATCAACTCCAAATGATGATCCTGAATTATGGGTTTCAAAGGAAGATGATCCTCAAAACTGGAATGTTCAGGTTTTTAGATCCATTGATTCTGGTTCTTTGAAAGGATTTCCTAAGGATGTACTTGAAGCTGAGGCTCAGAACCTTGTTTGTGCAAAAAATTTGGTCATAGACAAAAGTATTCAAACAGCATACATACATGCGATTAGATCTGCTCAACATTTTATTTATATTGAGAATCAATATTTCATTGGATCATCCTTTGCTTGGCCATCTTACAAAGAAGCAGGTGCGGATAACATAATTCCGATAGAATTGGCACTGAAGATAGTCAGTAAGATAAGGTCGAAGGAGAGATTTACAGTTTATGTTGTTATCCCATTGTGGCCTGAAGGTGTCCCTTCTTCTGTCTCAGTGCAAGAGATTCTCTTTTGGCAGGGACAAACTATGCAAATGATGTACAAAATCATTGCTCGGGAGTTAAAATCTATGCATCTTGACAATAGCCATCCACAAGATTACCTCAATTTTTACTGTCTTGGAAACAGAGAGAAGTTTAGAACTGATGTTTCAACTTCAAATAATTCATCTACAAATAATGGTGACACGGTTTCAGCTTCACAAAAGTTCCAACGGTTTATGATTTATGTACACGCCAAGGGAATGATAGTGGATGATGAATATGTGATGCTTGGTTCTGCCAACATCAATCAAAGATCTTTGGCAGGATCAAGAGACACTGAGATAGCAATGGGTGCATATCAACCCCATCATACATGGAGTAAAAAAAATGGACATCCACATGGTCAGGTATATGGTTATAGAATGTCCTTGTGGGCAGAACACATGGGGATCATAAATGATTGCTTCAAGGATCCTGAAAGTTTGGATTGTGTAAAAACTGTGAACAAAATTGCCGAAGACAACTGGAAGAATTACACGGCTGACGAATTTACCCCATTGCTTGGTCACCTAATGAAATATCCCATCAGTATAGATGCAAATGGGAAGGTAAGCGCCTTACCGGGATTTGAGTCTTTCCCAGATGTTGGAGGGAAAGTACTTGGTTCGCGGTCTACTCTTCCCGATGCTCTAACGACATAG 2544 0.4206 MGGDSKSENAVYLHGTLDLNIVEARFLPNMDMFSERFRRFFSALNTCSASFTGKRRNRSRRKKRKIITSDPYVTVCLSGATVARTRVISNSQNPTWNEHFNISLAHPASQVEFYVKDNDMFGADLIGVVTISAERILTGKTLSDWFPIIGSFGKPPKPDCAIWLEMKFTRCEDSPIYKNIVDPDRFAVRDSYFPVRHGGSVTLYQDAHVPDSMLPEIELDEGVVFEQGKCWEDMCHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPSGGNLSLGDLLKYKSQEGVRVLLLVWDDKTSHSKFGINTTGVMQTHDEETRKFFKHSSVNCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQGHGNNRKITTFIGGLDLCDGRYDTPEHRIFRDLDTIYEDDYHNPTFSAGTKGPRQAWHDLHCKIEGPAAYDILTNFEQRWKRASKWSELGQRFKRVSHWHDDSLIKLERISWILSPSESTPNDDPELWVSKEDDPQNWNVQVFRSIDSGSLKGFPKDVLEAEAQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNIIPIELALKIVSKIRSKERFTVYVVIPLWPEGVPSSVSVQEILFWQGQTMQMMYKIIARELKSMHLDNSHPQDYLNFYCLGNREKFRTDVSTSNNSSTNNGDTVSASQKFQRFMIYVHAKGMIVDDEYVMLGSANINQRSLAGSRDTEIAMGAYQPHHTWSKKNGHPHGQVYGYRMSLWAEHMGIINDCFKDPESLDCVKTVNKIAEDNWKNYTADEFTPLLGHLMKYPISIDANGKVSALPGFESFPDVGGKVLGSRSTLPDALTT* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1288 847 CDD C2_plant_PLD 10 169 - -
Lan3g1288 847 Pfam C2 domain 15 148 IPR000008 -
Lan3g1288 847 Gene3D C2 domain 10 167 IPR035892 -
Lan3g1288 847 PANTHER PHOSPHOLIPASE D 7 846 - -
Lan3g1288 847 PIRSF PLD_plant 2 847 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan3g1288 847 Pfam PLD-like domain 546 729 IPR025202 -
Lan3g1288 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Lan3g1288 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 349 384 IPR001736 GO:0003824
Lan3g1288 847 ProSiteProfiles C2 domain profile. 1 146 IPR000008 -
Lan3g1288 847 SUPERFAMILY Phospholipase D/nuclease 538 779 - -
Lan3g1288 847 SMART C2_3c 16 145 IPR000008 -
Lan3g1288 847 Pfam Phospholipase D Active site motif 350 384 IPR001736 GO:0003824
Lan3g1288 847 SMART pld_4 349 384 IPR001736 GO:0003824
Lan3g1288 847 SMART pld_4 693 720 IPR001736 GO:0003824
Lan3g1288 847 Gene3D Endonuclease Chain A 224 466 - -
Lan3g1288 847 PANTHER PHOSPHOLIPASE D 7 846 IPR015679 -
Lan3g1288 847 SUPERFAMILY Phospholipase D/nuclease 184 455 - -
Lan3g1288 847 Gene3D Endonuclease Chain A 508 741 - -
Lan3g1288 847 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 169 IPR035892 -
Lan3g1288 847 Pfam Phospholipase D C terminal 768 837 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1288 Lan-Chr3 24883035 24889030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1288 7 676 Phospholipase D Gene Family (Wang group) AT4G35790 66.038 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1288 K01115 - gmx:100795859 1508.81