Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1281 ATGCTTGATTCAGTTCTGTTAGCACTTTTTCTACCATGCCTTGGCATGAGCTTTGTTTTCATAATCTACATGTGTCTTCTATGGTACGCTACTACTTACCGAAGTGATAATCCCCGGCTACCGGTGAAGCCGGTATCTGAAAAGGGTTTATCAGCTTCAGAACTCGAGAAGCTTCCGAGAATCACCGGAAAAGAATTAGTCATGGGAACCGAATGCGCCGTGTGTCTTGATGAGATAGAGAATGAGCAACCGGCTCGACTGGTTCCTGCTTGTAACCATGGCTTCCACGTGGAATGTGCTGACACGTGGCTTTCTAATCACCCTTTCTGTCCGGTTTGTAGAGCTAAACTTGATCCTCAAGTTTTCAATAATCCATGCTAG 381 0.4541 MLDSVLLALFLPCLGMSFVFIIYMCLLWYATTYRSDNPRLPVKPVSEKGLSASELEKLPRITGKELVMGTECAVCLDEIENEQPARLVPACNHGFHVECADTWLSNHPFCPVCRAKLDPQVFNNPC* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1281 126 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 124 - -
Lan3g1281 126 SMART ring_2 72 113 IPR001841 -
Lan3g1281 126 Pfam Ring finger domain 71 114 IPR001841 -
Lan3g1281 126 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 124 - -
Lan3g1281 126 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
Lan3g1281 126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 120 IPR013083 -
Lan3g1281 126 SUPERFAMILY RING/U-box 71 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1281 Lan-Chr3 24836229 24836962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1281 1 121 C3H Transcription Factor Family AT5G42200 58.730 1.68e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1281 K19037 - gmx:100811160 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1281 3 24836229 24836962 Lan3g1281 3 24836229 24836962 PCT