LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan3g1279	ATGAAAAGCAATTCAATTGTCTTGTTAGTATTCCATTTTCTCTTCCTGTTTCTTGGAGAGTCAAGTTCACCATCACACAATGGAGTTTATGTCGTGTACATGGGAGCCGCGGATTCGAGAAATGCTTCCCTTCGAAGTGACCATGCTCATATTCTGAACTTAGTGCTAAGAAGGAATGATAACGCTCTAGTACGCAACTACAAACATGGTTTCTCAGGCTTCGCAGCTCGTCTATCCAAAGAGGACGCAGCCTCTATTGCTCAGAAACCTGGAGTTGTGTCTGTCTTCCCAGACCCTATTTTAAAGCTCCATACAACACGTTCATGGGACTTTCTCGAGTATGATAGCCACGTCATAATAGACTCGGACCGAAACACACTCTCCAATTCTTCTTCCTCATCAGACATCGTCATTGGCATCATAGACACAGGAATATGGCCAGAGGCAGCTAGCTTCAGTGACAAAGGTATGAATCCTGTTCCATCTCATTGGAATGGTACATGCATGGCATCACAGGACTTCAATTCCTCTAACTGTAATAGGAAGCTAATAGGAGCAAGGTATTATCCTAGTCCTGATGGGGATGCTACTCTAGCAAGCTCGGTAAGGGATAGCTTAGGCCATGGGACCCATACAGCCTCCACAGCAGCCGGAAGCACCGTGTCCGTTGCATCATATTATGGTCTTGCTGAGGGGACTGCTAGGGGTGGATTCCCGGAATCCAGGTTAGCGGTATACAAAGTATGCTCTGAGTTCGGGTGTAGAGGCTCCTCCATCCTTGCAGCGTTCGATGATGCCATTGCAGATGGAGTGGATATACTATCACTCTCACTTGGTGCATCTGCCTTGTTTCATCCTGACTTGATGACTGACCCGATTGCCGTTGGAGCATTCCACGCGGTGGAGCGTGGCATCATGGTGGTTTGTTCTGCAGGGAATGATGGACCAGACCCAAACACGGTTGTCAATGCCGCACCTTGGATTTTGACCGTTGCAGCAACAACCATTGACAGAGACTTTCAGTCTAATGTAGTGTTGGGTGGTAACAAAGTGGTCAAGGGTGAAGCAATAAATTTCTCCCCTCTTTCAAGCTCCCCGGAGTATCCATTGATATACAGTGAAACAGTTAAGAAAAGTGACGCCGACATAGATGAAGCAAGGCAATGCCACCCAGATTCATTAGATGAAAGTAAAGTGAAAGGGAAGATCATCCTCTGCAATGGTGAAAGTGATACAGTTTATTCACCTATAGCTATAGCAGACACGGTGAAAGAGGCCGGAGGATTAGGCCTTGTTCATATTACTCCTGACCAGAACCGCGCAATAGCTTCAAAGTATGGTGATTTCCCAGCAACCACAATAAGTACTAAAGATGCAACAACAATCCTCCAGTATGTCAATTCAACAAGCAATCCGGTGGCAACAATTCTACCAACGGTTTCAGTCATTAATTATAAGCCCGCGCCTATGATGACATACTTTTCGTCAAGAGGGCCTTCAACACTTTCAAAGAATATTCTGAAGCCTGATATTGCAGCACCGGGAGTTAACATTCTTGCAGCATGGCTTGGAAATAGCACAGAAGAGGTTCCGAAAGGGAAAACGTATTCTCCATACAACATCATCTCAGGAACTTCAATGTCATGCCCACATGTATCAGGTTTTGCAGGAAGGCTCAAATCTCTAAACCCCACTTGGAGTGCCTCTGCAATCAGATCAGCTATCATGACCTCAGCAACTCAAATAAACAATATGAAGACTCCCATCGCAACGGATTCAGGGTCACTCGCCACACCTTATGACTATGGAGCAGGGTTTATCACAGCATCTGGACCGTTGCAACCAGGGCTAGTTTACGAAACTAGCACCACTGACTACTTGAACTTCTTGTGCTACATAGGACTTAATACAACAACTGTTATGGTCATCTCAAGAACTGTCCCTACTAGTTTCAGTTGCCCCAAAGATTCGAGTTCTGATCTTATATCGAACATCAACTACCCTTCCATATCAATCTCGGACTTCAATAAGAAAGGTGGAGCTGTGAACGTGAGCAGAACTGTTACAAATGTTGGTGAAGTTGATGAAATAGAATACTCTGCGGCCGTGGATGCTCCTAGTGGACTAAATGTCAAAGTAATTCCAGATAAACTCAAGTTTACAAAAACCAGTAAAACACTAAGTTACCAAGTTACTTTCTCCCTAACTTCAACTTCTTTGAAGGAAGATCTGTTTGGATCCATTACATGGAGTAGTGATAAATATACTGTTCGGAGTCCTTTTGTATTAGCCAAGTAG	2298	0.4456	MKSNSIVLLVFHFLFLFLGESSSPSHNGVYVVYMGAADSRNASLRSDHAHILNLVLRRNDNALVRNYKHGFSGFAARLSKEDAASIAQKPGVVSVFPDPILKLHTTRSWDFLEYDSHVIIDSDRNTLSNSSSSSDIVIGIIDTGIWPEAASFSDKGMNPVPSHWNGTCMASQDFNSSNCNRKLIGARYYPSPDGDATLASSVRDSLGHGTHTASTAAGSTVSVASYYGLAEGTARGGFPESRLAVYKVCSEFGCRGSSILAAFDDAIADGVDILSLSLGASALFHPDLMTDPIAVGAFHAVERGIMVVCSAGNDGPDPNTVVNAAPWILTVAATTIDRDFQSNVVLGGNKVVKGEAINFSPLSSSPEYPLIYSETVKKSDADIDEARQCHPDSLDESKVKGKIILCNGESDTVYSPIAIADTVKEAGGLGLVHITPDQNRAIASKYGDFPATTISTKDATTILQYVNSTSNPVATILPTVSVINYKPAPMMTYFSSRGPSTLSKNILKPDIAAPGVNILAAWLGNSTEEVPKGKTYSPYNIISGTSMSCPHVSGFAGRLKSLNPTWSASAIRSAIMTSATQINNMKTPIATDSGSLATPYDYGAGFITASGPLQPGLVYETSTTDYLNFLCYIGLNTTTVMVISRTVPTSFSCPKDSSSDLISNINYPSISISDFNKKGGAVNVSRTVTNVGEVDEIEYSAAVDAPSGLNVKVIPDKLKFTKTSKTLSYQVTFSLTSTSLKEDLFGSITWSSDKYTVRSPFVLAK*	766

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan3g1279	765	ProSitePatterns	Serine proteases, subtilase family, serine active site.	544	554	IPR023828	-
	Lan3g1279	765	CDD	Peptidases_S8_3	101	580	IPR034197	-
	Lan3g1279	765	Pfam	Peptidase inhibitor I9	29	104	IPR010259	-
	Lan3g1279	765	Gene3D	-	630	765	-	-
	Lan3g1279	765	PANTHER	CO(2)-RESPONSE SECRETED PROTEASE	48	763	-	-
	Lan3g1279	765	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	48	763	IPR045051	-
	Lan3g1279	765	CDD	PA_subtilisin_like	343	476	-	-
	Lan3g1279	765	Pfam	Subtilase family	133	605	IPR000209	GO:0006508\|GO:0008236
	Lan3g1279	765	Pfam	Fibronectin type-III domain	664	762	IPR041469	-
	Lan3g1279	765	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	18	104	IPR037045	-
	Lan3g1279	765	Gene3D	Peptidase S8/S53 domain	135	626	IPR036852	GO:0004252\|GO:0006508
	Lan3g1279	765	ProSiteProfiles	Serine proteases, subtilase domain profile.	108	613	-	-
	Lan3g1279	765	Gene3D	-	337	483	-	-
	Lan3g1279	765	PRINTS	Subtilisin serine protease family (S8) signature	133	152	IPR015500	-
	Lan3g1279	765	PRINTS	Subtilisin serine protease family (S8) signature	204	217	IPR015500	-
	Lan3g1279	765	PRINTS	Subtilisin serine protease family (S8) signature	543	559	IPR015500	-
	Lan3g1279	765	SUPERFAMILY	Subtilisin-like	104	616	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan3g1279	Lan-Chr3	24819674	24823848	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan3g1279	22	763	Subtilisin-like Serine Gene Family	AT1G20150	51.832	0.0	754

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan3g1279	K25898		-	gmx:100820194	1058.13