Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1274 ATGGCTCTTGAAGATTTCTTTACCTTGAGTGAGATGAAAGATGGGCTCACAACCCCTTCTAGAGTGCAGGAGCTTGTTTCTGTAATGCAGAAGGAGAAAGATTGTGTGGCTAAAAATGCTGGCGATGCTACAAGGCAGTGGTCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTTGATCTTTTTATTCAATTAGATGGACTTTGGTTCATTAATAGATGGTTAAAGAACGCTCAAAATTTTGCTCTTGATGCAAATGATAACTTTATTGAAGAAACAATCACTGCAATGTTACGAGCAGTTGAACAGCTGCACCTTGACGGTCAGAAGTCAGCTTCATCTGGAATTCATGCAACTGTAAGTAATCTTCTTGACCATCATAGCTCTACGGTTCAGAATAGAGCAAGAGTACTGTTTGACAGCTGGAAGGGAGGTGGAAACGGTGATGCTGATTCTTGTGATATTGCTGAAGTCAACAATGCAAGTGGCAAGATTGTCAGAGAGGAAGACCAGCCATCTATAAGTGAAGTGGGCAATGATAATGATCATGCATCAGGACTTGCTGGGAGTGAGAAGTCTCTATTGAGAAGCCCGGATAGTTCACCATCAGAAAGGATTGCCAGTGTTCCTATACAGAGTTCTGGCGATGCAAGTGTGAAATGTGAAGAAATCAAAGAGAAATCACCAAACTATCTTGCTAGTGTTTCATCTTCTGCCCAAGAAGTTGCTTCTCTACATGAAGGATTACCATTATATGCTCCAGGTGAGAATGCTTTGGTTGAAACCTGTAACTTACCTGTTCTAAAGCAAGACAGTTTTGAAGGACAACCAGATGATGTACTGTTAAGTGACTTCACCAAAAAGGAGCAGCAGGAACAAAATGTTAATGGCCCCCCAGAAAAATTAGATGCACCAGAGATATGTTCAGTGTCCACTAAGCTAGAGCCTGAACCTGTTTCCATGGGTGCTAGTGAAACAAAAGCACTAGAACCTGTAAAAGAAACAACCTTGAAGCATAATGTTGAAAATAATGAGGTTGGTTTCTGTCATAAAATAGTCATTTCTGATGGCTCGAGGACAGCTATATCTGATAGAAAGAGCAGGGTGGATCATATCATAGCTGTATCTGGAGTTTCAGAATATGATGATGACCGTCCTTCTAATTTGTTGTGGGACTCATCAGTCAGTGAAAGTGAGTTGGGAAAGAGTGAGATATTAGAGATGTCCATCTCTGGAACAGAATATGTCAGAACAGTAAAGGAAGGCAAGGGCCGTGTTTCTAGTGAAGGTGAGAACACCTCAAATGCTTCTGATTCTAATAAACCTGGAAAAGGTTCCAGAAGCCCTAGCATAATGGACAAGAAAGGTTCTGCTGATGAATTTGACAATGGCACGGTTGATGCTATAGAAGTCACTCGACTAATTGCTCTGGAAATTGAGAGAGAAGTCCTCAGTTCTTCTTCTGAGAAAATTGCTCAAGGTGGAATTAGGCAACCAGGCAGCCCAGAGTCTGTAGAAAAGGGGGATGAACCTAATCTTGTGCCACCCAAGGAAGTCTCATCCAGAGAAAGCCACTCTATCGAGGCATGTTCTGATGTGGAGCAGCGTGCGAGTATTTCAAACAACATTGAGGCTGAGCCGGAATGCAGACCTAACATGGAGTCTTTGCAGGTAACTGAAGCGGCTGAAGATTCAGGAGGTAATTCAGAAAAACCCCTCTGTATGTTTGATCTTAATGAAGATGGTTCTGATGGTATGGATGTTTCTGTAAATGCTATGTCTACTACAATACCGGTTGTCTCTGCTTCAAAGCCTGCACCAAATCCTGGGCTGCCCGGGTCCCCTTTGCAGTTTGAGGGGACACTTGGATGGAAGGGGTCAGCTGCAACCAGTGCCTTTCGTCCAGCATCACCTCGTAACAGTGAGCGGAATCTCTCTGTTGGTGGGAGTTCTGATATTTCCAAGCAGAGGCAGGATTGGCTTGATTTTGATCTAAATGTAGCTGATGGTGATGAAGGACAAACAAAACCATTTGCCGAATCTTCAGGCCCTCCTCCTGGCCAATTACCGGTGGAATTTAGTCCTAAAAGATCAAGCAGGCTGGAATTGGATTTGAACAGTATTGGAGATGATTGTGATGCCCAACCTTCACATCAGAAGATGGAGGGGCAACTTTTCCTTGGAAGAAATGGCTATTGGAGTCCATCACCTGCATCATCAACATCATCGATGCAGCCTTCCGTTAGAAACATTGATTTGAATGACAGGCCATGCCTTCAAACTGATTTAGTAGATCAGGGGCCAGGTAAGTCTTCCCATTTTATCGATGCATTCGGGCGTTCGAAATCAGATGCTCCTGTTATCTCTATATTCGGGACCAAAGTTGAAGTTGATAGAAGAGAAGAATATGTTCCTCCAACTTTGTTTTTACCAAATGGCAAGGCTATTGAACCTGCAATAGATCTTACAATGTCAAGAACAGGTGGCATTTTAGGAATACCACCCACAGTATCCTACAATCATTCAAGTATTTTCGGGTATAATGGAGTAGCATCTGCTTCAACACCCCCTTTGTCTTATTCATCAGCCATGTATGGGTCAGGTGGCACGATTCCATATATGGTGGACTCTAGAGGAGCTTCAGTTGTCCCTCAAGTTGCTGCAGGATCTTCATCAACTGTCCTTCCATCTTATTCTCAGCCACCGTACATCATGAACATGTCTGCTACACAACTTGCTTTAAATGGAGCTGGACCGTCACACCCTCCTAACCTTGACCTAAACTCTGGCTTCATGATTGAGGGTGGTGGGAATAGAGATGCATTAACAGCACGTCAGTTTTTCTTCCCGGGTCAAGGCACCATGCTACAACCCTCCAGTTCTGGGGTTGGTGGAAAAAGAAAGGAACCAGACAGTGGATGGGAATCCTACCCATTTAACTACAAGCATCCACAACCTCCATGGAAGTAG 2982 0.4359 MALEDFFTLSEMKDGLTTPSRVQELVSVMQKEKDCVAKNAGDATRQWSAVASTIAATENKDCLDLFIQLDGLWFINRWLKNAQNFALDANDNFIEETITAMLRAVEQLHLDGQKSASSGIHATVSNLLDHHSSTVQNRARVLFDSWKGGGNGDADSCDIAEVNNASGKIVREEDQPSISEVGNDNDHASGLAGSEKSLLRSPDSSPSERIASVPIQSSGDASVKCEEIKEKSPNYLASVSSSAQEVASLHEGLPLYAPGENALVETCNLPVLKQDSFEGQPDDVLLSDFTKKEQQEQNVNGPPEKLDAPEICSVSTKLEPEPVSMGASETKALEPVKETTLKHNVENNEVGFCHKIVISDGSRTAISDRKSRVDHIIAVSGVSEYDDDRPSNLLWDSSVSESELGKSEILEMSISGTEYVRTVKEGKGRVSSEGENTSNASDSNKPGKGSRSPSIMDKKGSADEFDNGTVDAIEVTRLIALEIEREVLSSSSEKIAQGGIRQPGSPESVEKGDEPNLVPPKEVSSRESHSIEACSDVEQRASISNNIEAEPECRPNMESLQVTEAAEDSGGNSEKPLCMFDLNEDGSDGMDVSVNAMSTTIPVVSASKPAPNPGLPGSPLQFEGTLGWKGSAATSAFRPASPRNSERNLSVGGSSDISKQRQDWLDFDLNVADGDEGQTKPFAESSGPPPGQLPVEFSPKRSSRLELDLNSIGDDCDAQPSHQKMEGQLFLGRNGYWSPSPASSTSSMQPSVRNIDLNDRPCLQTDLVDQGPGKSSHFIDAFGRSKSDAPVISIFGTKVEVDRREEYVPPTLFLPNGKAIEPAIDLTMSRTGGILGIPPTVSYNHSSIFGYNGVASASTPPLSYSSAMYGSGGTIPYMVDSRGASVVPQVAAGSSSTVLPSYSQPPYIMNMSATQLALNGAGPSHPPNLDLNSGFMIEGGGNRDALTARQFFFPGQGTMLQPSSSGVGGKRKEPDSGWESYPFNYKHPQPPWK* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1274 993 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 18 149 IPR035441 -
Lan3g1274 993 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 148 IPR035441 -
Lan3g1274 993 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 993 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 633 657 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 426 465 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 198 219 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 432 450 - -
Lan3g1274 993 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 993 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 490 537 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 166 222 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 637 657 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 957 993 - -
Lan3g1274 993 MobiDBLite consensus disorder prediction 671 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1274 Lan-Chr3 24793602 24798988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1274 - - gmx:102664074 1244.18