Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1271 ATGCGTGGGTTGCAAAAATCAAAACGAGTAACATGGGCCTCTGCTTTAAATCTTTGTCAGGTTAAGTTATTCTTATCAGAGGACTCTCCTTCACTAGTTGGGTTAAGTTCTCAGGATCACCTTCAAGCGAAGAGATCATTGCACTCGCATCATGACAGACCAGGTTCTGATGACATGCTACCTCCTGGTTTTGAGGGAACTCATGCTTCAAGTCAGTTTGAGATAGATCTGTCCCAAATACCGGTGATTCAATGGATTAGTCCACCCAAGATTGTGCTGGATCAGACATGGCTAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAGGATCAACATAAGAGGGAAATGAGAGTACTTGAAGCTATTTATCCTCGCCCATCCTCCATTCCTCCAAACCCTGCTATCGCAATGGATGTTGAAGATTCCCATGCCATTGATGATGGTCAAACTGCTTTGATACCAATTACGCCTCTTGAAGATGAAGACGCTGCAGTTGATGCAGTATCTGATTCACAGTCTATCGAGTTACCTCCTGGCATACCAAGAAATCCGATGCAGTTAGCTGGCGGTGTAGATATAGCTGCCGCATCTGCAGCTTTAACTAATATAATAAAGAGCAATCAGCATGGAAATTTTACTGAACATGAGGTGCTTAATAGTATTCTCAACAACACAGAAATGATTGAGACGTTGGTTCGAGATTATGGGGCAACTAACAACCTGCAATATGTACATAACCAAGGGTCATCTTCAGTAGCCTTTTCTCATCCACACGCTCCTAATAATCAAGGAGAAACCACTATACCTTCACTTGGTCTTTCAGCTACTTCTTATCCTCCCTCAACTGGAGCTGAAGTGGAATCTATTGCTAGTCAATGGCTTCCGAGGCCGTCGATGAGTTCAGTTACTGTTTCTCCTCCTATCGAAGCCCCACCCGTAAAGGATGCGAACTACTATAAGAGCTTGATTCAACAACATGGAGGAGATAGACAAGAAACACCTCCATATTCCAGCAATCATCAGATTCATCAACCAGTAACTAACCCGGAGACCACTCACATTTATAGATCAAGGGATTCGAAACCGAAGATAATGAAGCCATGCATCTTCTTTAATAGTTCTAGAGGATGTCGGAATGGAACTAATTGTGCATACCAACATGATGCATCGTTCCAGCCACGGGGTGGTGCTGTGCCAAGGATGCAAAGTTCAAAGAGAATGAAAATGGATAGTGAGATTAGCAGTTAA 1248 0.4343 MRGLQKSKRVTWASALNLCQVKLFLSEDSPSLVGLSSQDHLQAKRSLHSHHDRPGSDDMLPPGFEGTHASSQFEIDLSQIPVIQWISPPKIVLDQTWLVVAGEESKEVEDQHKREMRVLEAIYPRPSSIPPNPAIAMDVEDSHAIDDGQTALIPITPLEDEDAAVDAVSDSQSIELPPGIPRNPMQLAGGVDIAAASAALTNIIKSNQHGNFTEHEVLNSILNNTEMIETLVRDYGATNNLQYVHNQGSSSVAFSHPHAPNNQGETTIPSLGLSATSYPPSTGAEVESIASQWLPRPSMSSVTVSPPIEAPPVKDANYYKSLIQQHGGDRQETPPYSSNHQIHQPVTNPETTHIYRSRDSKPKIMKPCIFFNSSRGCRNGTNCAYQHDASFQPRGGAVPRMQSSKRMKMDSEISS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1271 415 MobiDBLite consensus disorder prediction 43 67 - -
Lan3g1271 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 410 - -
Lan3g1271 415 MobiDBLite consensus disorder prediction 391 415 - -
Lan3g1271 415 ProSiteProfiles Zinc finger C3H1-type profile. 362 390 IPR000571 GO:0046872
Lan3g1271 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 410 - -
Lan3g1271 415 MobiDBLite consensus disorder prediction 325 345 - -
Lan3g1271 415 MobiDBLite consensus disorder prediction 43 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1271 Lan-Chr3 24759296 24763877 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan3g1271 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1271 - - cam:101501814 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1210 15 20540470 20545334 Lan3g1271 3 24759296 24763877 LSH