Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1252 ATGGAACATAACAATCTCCATCACCTTCAACAAGACCAACCTCAACCTCTTGAGCCAGCTTCCTCTTTGACCCCATCTTCCTATGGATCACTTGGTGGTAGGAGCCATTCTTGGACCCCAAATATTACTTTGAATGTTGGTAACTTCAACCAAAACCTGCAAGAAGCTAATCCCAGATCAAGAGCTTTAATGCACAAGAATGATATGATCCAAGATTTAGGTTATCATCATCATTGGACTGGTGATGGAGAAAGCTACTTAGCCCCTACATTCAGTGAAATGCTAAATAGTACTCCTTCCAACATGGAAGACTATAAATATCACAATCCAGTTCATTCTACTTCTACAGTGACCAACCAGATGAAGAATAGTAATGAGTGCAAAGATATGAATGCACTGAATGAGAAGTTGTTGCTGAAGACACTATTTTCAGGAGATATGTACTCAACTAGTGCTGAAAATTATGGTAACTTTGGTGCTGCTACTCATCATGGAGTACCAAGTAGAGGGAACTTTAGCCAGATTTATCCAAGTATAAATATCTCAAACTTGAGCCACTCATCAACTTCTACACCAATTTCAAGCTCCTTGAATATTATGAGCACTACACAGCCCTTAGATCTGTTAACCTCACCAACATCATTTCCTATGGGTTTAAGTCATCGTTCACATTCACAAGATCATTCTTTTGGTAATGATAATCTTTCTTTTCGTCTAGAACATATGCAGCAACCCACTGACAGGTCCTCATGTAATAACTCTGGTAATCTATCACAGTTGAGCAATGGTGAGGTGGAAACAAAGAGACCCTGCACTTTGATGGATTCAAAGACTACTCAATCTCAAACAGCATCGAAGAAATCACGATTGGAATCACGCCCATCATGTCCACTTATTAAGGTTAGGAAAGAGAAGTTGGGAGATAGAATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCAGTTCTTATGGAAGCTATTGGATACATTAAATTCCTTCAAGGCCAAGTTGAGACACTGAGTGTTCCATACATGAAATCATCTCAAAACCAGAACAACAGAATCATTCAAAGGGGTTCAGCCATAGGAGACACACATGGAGAACCAAATCAAGATCTTAGAAGCCGAGGTCTCTGTCTTGTTCCATTGTCTTGCATGTCATACATAGCAGGTGATGGTGGCACTGAGGTGTGGCAACAACCTAACTTTGGTGGAGGAACTTAG 1242 0.4066 MEHNNLHHLQQDQPQPLEPASSLTPSSYGSLGGRSHSWTPNITLNVGNFNQNLQEANPRSRALMHKNDMIQDLGYHHHWTGDGESYLAPTFSEMLNSTPSNMEDYKYHNPVHSTSTVTNQMKNSNECKDMNALNEKLLLKTLFSGDMYSTSAENYGNFGAATHHGVPSRGNFSQIYPSINISNLSHSSTSTPISSSLNIMSTTQPLDLLTSPTSFPMGLSHRSHSQDHSFGNDNLSFRLEHMQQPTDRSSCNNSGNLSQLSNGEVETKRPCTLMDSKTTQSQTASKKSRLESRPSCPLIKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKSSQNQNNRIIQRGSAIGDTHGEPNQDLRSRGLCLVPLSCMSYIAGDGGTEVWQQPNFGGGT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1252 413 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 112 398 - -
Lan3g1252 413 MobiDBLite consensus disorder prediction 8 34 - -
Lan3g1252 413 MobiDBLite consensus disorder prediction 242 293 - -
Lan3g1252 413 Gene3D - 300 364 IPR036638 GO:0046983
Lan3g1252 413 CDD bHLH_AtbHLH_like 300 347 IPR045239 -
Lan3g1252 413 MobiDBLite consensus disorder prediction 242 290 - -
Lan3g1252 413 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 339 IPR011598 GO:0046983
Lan3g1252 413 PANTHER OS01G0105700 PROTEIN 112 398 - -
Lan3g1252 413 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 300 353 IPR036638 GO:0046983
Lan3g1252 413 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1252 Lan-Chr3 24623404 24627703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1252 25 413 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 39.778 1.73e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1252 - - lang:109326222 591.652