Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1242 ATGATCAAAAAACAACAACCACTGCTCCTTTTAGTTTTCTTCTTCCCAATTATCACATCCCAAGTTAACTACCGCGCGTGCAACCAAACATGCGGTTCCGCAAAACCATTCTCTTACCCTTTCGGCTTCTCCTCCGGCTGCCAAATCCGCCTCAACTGCACCGCGGACGGTGAAATCTTCATCGGTGAATTCCCGGTTCAATCTGTAACCACGGAAAGCATAATCGTGAACATCAAAGGTCAATGTAATCGTCCAATTGATACCTTTCACCAATTATTCAGTCACAAATATGCACCTACTTCAGGAAATGTTATATTGTTGAAGAATTGCACTGAAACGATGTCGCAGTGTTCGATAACGGAGACACTTGTTGAGTCTCACTTTGATTCCGACGGTTGTAACGGCGATAGGAGCGGGAATTTGAGTTGCTACGTTGAAAACAGCACGAAGGGGTTTATGAGTGATAGGAAATTGGAGAGACTCGGATGTGAGTACTTTATGTCTTCGATATCGACTGAGGATTTGAGGAATAATTCCGGTACGGCGGTGTCGTTGGAGGTAGCGACGATAGAGCTTGGATGGTGGCTTAAGGGAAGTTGCGAATGTTCCGGTGATGCCAATTGTACACAAATTGTGTCTCCGGTGGATGGAAAGGTCGGATTCCGATGTCTATGTAAACAAGGGTTCGTCGGTGATGGTTTTCTGGCCGGAATTGGTTGCCGGAAAGATTTAATCTCTTCAACATGCAACCCCTCGAAGTACCTGTTAGGCAAATGCGGAGGAACAGCGAGATTTCTTGTCTTAATTGGAGCATTTGTTTTTGGAGCTTCATTGATGATTACAGTGGGTTCACTATGTTTTTTGTTTCGGAGGCGCACCAAATTGAGAGTCACAAAGAGCACAAAAAGGCGCATAACCGAAGCTACCGGCAATTACAGTGTTCCTATCTATCCATACAAAGACATTGAGAAAGCCACAAATAGCTTCTCAGAGAAACAACAACTTGGAAATGGAGCATATGGGACAGTTTATGCAGGAAAACTTTACAATGATGAATGGGTTGCAATCAAGAGAATTAAGCATAGAGACACTGATAGTATTGAGCAAGTAATGAATGAAATCAAGCTTCTTTCCTCAGTTAGCCACACCAATTTAGTGCGCTTGTTGGGTTGTTCCATAGAATATGGTGAACAAATCCTTGTCTTTGAGTTCATGCCCAATGGAACATTAAGTCAGCATTTGCAAAGAGAAAGAGGGAATGGTCTTCCATGGCCAGTTAGGCTCACAATTGCAGCAGAAACAGCACAAGCAATAGCACATCTTCATTCTACTATTAATCCTCCTATTTACCATAGAGATATAAAGTCAAGTAACATACTTTTGGACTATAATTTCAGATCCAAGGTAGCAGATTTTGGTCTCTCTAGACTTGGAATGACTGAAACATCTCACATTTCAACTGCCCCACAAGGAACCCCTGGCTATGTTGATCCACAATACCATCAAGATTTTCAACTCTCTGACAAAAGTGATGTGTATAGCTTTGGTGTTGTTCTTGTTGAGATTATAACAGGAATGAAAGTAGTAGACTTTTCGCGCCCTCATAATGAAGTAAACCTAGCTTCTCTTGCTGCAGATAGGATTGGAAAGGGGCTATTAGATGAGATTATAGATCCATTTCTTGAGCCTGAAGTAAGCAATGATGCTTGGACCTTTTCTTCTGTACACAAGATTTCTGAGCTAGCATTTAGATGCCTTGCATTTCATAGGGATATGAGGCCTTCTATGACAGAAATAGCAACTGAGTTAGAGCATCTTAGGCTTAGTAACTGGTCAAGTTTTGGAGATAACAATGTTACAACTTCAACTGAGTTGTCATCTTGTTCTACTTCCTCTTATCAAAGTGAGAAACCACTAAAAATGATCATGGAGAAGAAGGTTGAGCCAGAGGTTAAAGCTAATAAAGCTTATCTCAGAATACAAACTGGGCCAGTTGCATTAAAGTCATTGGAGAGGAACAATAGTGCATCACCTGTTTCAATGCAAGATCCAGAAATATGGTTGAGTGAACAAAGCTCTCCTTCATCATATAGTTTTCCTAGCAAGTCATTTAATTGA 2118 0.4136 MIKKQQPLLLLVFFFPIITSQVNYRACNQTCGSAKPFSYPFGFSSGCQIRLNCTADGEIFIGEFPVQSVTTESIIVNIKGQCNRPIDTFHQLFSHKYAPTSGNVILLKNCTETMSQCSITETLVESHFDSDGCNGDRSGNLSCYVENSTKGFMSDRKLERLGCEYFMSSISTEDLRNNSGTAVSLEVATIELGWWLKGSCECSGDANCTQIVSPVDGKVGFRCLCKQGFVGDGFLAGIGCRKDLISSTCNPSKYLLGKCGGTARFLVLIGAFVFGASLMITVGSLCFLFRRRTKLRVTKSTKRRITEATGNYSVPIYPYKDIEKATNSFSEKQQLGNGAYGTVYAGKLYNDEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVFEFMPNGTLSQHLQRERGNGLPWPVRLTIAAETAQAIAHLHSTINPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQDFQLSDKSDVYSFGVVLVEIITGMKVVDFSRPHNEVNLASLAADRIGKGLLDEIIDPFLEPEVSNDAWTFSSVHKISELAFRCLAFHRDMRPSMTEIATELEHLRLSNWSSFGDNNVTTSTELSSCSTSSYQSEKPLKMIMEKKVEPEVKANKAYLRIQTGPVALKSLERNNSASPVSMQDPEIWLSEQSSPSSYSFPSKSFN* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1242 705 Pfam Protein kinase domain 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1242 705 Gene3D Transferase(Phosphotransferase) domain 1 405 626 - -
Lan3g1242 705 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 644 IPR045274 GO:0007166
Lan3g1242 705 ProSiteProfiles Protein kinase domain profile. 329 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1242 705 MobiDBLite consensus disorder prediction 669 705 - -
Lan3g1242 705 SUPERFAMILY Protein kinase-like (PK-like) 305 604 IPR011009 -
Lan3g1242 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Lan3g1242 705 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 21 644 - -
Lan3g1242 705 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Lan3g1242 705 SMART serkin_6 329 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1242 705 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1242 Lan-Chr3 24549897 24554888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1242 1 696 Receptor kinase-like Gene Family AT2G23450 51.753 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan3g1242 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1242 - - mtr:MTR_3g111510 1024.62