Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1237 ATGCAGGCTTTAGGCTGCACTGTGATTCTTTCCTTATTCGTCCTTTCATCATTCTCATCCTTCTCCTTTGCGCTTTCCAATGATGAAGCCGCTTTCATCGCTCGCCGACAATTGTTACACCTTCATGAGAATGAGGAATTAACAGAGTCTTATGTAGAAAGCTACAAAACAGATCTAAAATTTGACAACCCAAGGCTCAAACATGCATACATTGCACTTGAGGCTTGGAAAAAAGCAATGTATTCTGACCCATCAAACTTCACATCCAATTGGGTAGGATCAGATGTTTGCTCATACAAAGGAGTTTTTTGTGCCCCTGCCCTTGATGATCCCGAAACCGAAGTTGTGGCCGGGGTTGATCTTAACCATGCAGATATTGCTGGTTACATTCCTCCTGAGATTGGTTTGTTAAGTGATCTTGCTCTTTTGCATATCAACTCAAACAGGTTCTGTGGTGTTCTCCCAAAGAGCTTATGCAATCTAAAACTTATGCATGAGCTTGATGTCAGTAACAACCGTTTTGTTGGTCCATTCCCTCAATCCGTTATTTGCCTTCAAGATATCAAATATCTTGACCTAAGGTACAATGACTTTGAAGGGGAACTACCTTTTGAGCTATTCAACAAGACACTTGATGCTATCTTTTTGAACAACAATAGATTTGTGTCGACGATTCCAGAGAACCTAGGAAACTCACCAGCTTCAGTTGTTGTTTTGGCCAATAACCATTTCAATGGATGCATTCCTGGAAGCATTGGTCAAATGGACAAGACCCTTAACGAGTTTGTGGTTGTCAACAACAACCTCTCTGGATGCTTGCCCGTTGAAATTGGAAAGCTTCGCAGCGTCGAGGTGTTTGATGTGAGCCAAAACATGCTTGTTGGTGCGTTGCCAAATACCTTAAACGGACTCGGAAAGGTGGAAGAGTTATCCATTGCAAATAACAAGTTTACAGGTTCTGTATCACGTAGCATCTGTAGTTTGCCTGGCTTGGTGAACTTCACGTTCTCAGATAACTATTTCAATGAAGAGGAAAAAGATTGTGTACCTCAATCTAGAAAGGATATCGAGTTGAATGATGAGAGAAATTGCATTCCTAATAGGCCAGAACAAAGGGGTGCAAGTGAATGTAATGCAGCCATAAGCAAGGCTGTTGATTGCAGCAAGACTCAGTGTGGCCACCCATCAACCCCATCTCATTCCAATAATCCTCCAAGTGAAACTCCATCAGAACCGGAACCAAAACTTACCCCTTCTATCTCTAATCCTCCAACCGAGACTCCCTCGAACCCAGAATCACCGCCACAGACACCAGAAACCCCCAAAACAAAACCACCCACACCAGAAACACCAAAAACACAAGCACCTGTCACACCACAAACACCTAAGCCAGAACCTCCACCCACACCAGAAACACCAGAAGTGGAACCACCTGTCACACCACAAACACCCAATCCAGAACCTCCACCTACACCTGAAACACCAGAAGTGCAACCACCTTCCACACCACAAACCCCTAAGCCAGAACCACAACCAACCCCCAAAGCAGAGCCACCTCCCACACCACAAACAACAATACCACAACCACCACATTCACCAGAAACACCTAAATCGCCCCCACTTGAGGATGATCCTCACAATGAAGCGCCCCGCGGACGATTTAGGACTCCACCACCATCAGTCCATTCTCCCACACCCCTAGTCCAGTCACCTCCACCACCAGTCCACTCACCTCCACCACCAGTCCACTCACCTCCACCACCAGTTCATTCTCCACCACCCCCAGTCCACTCACCTCCACCACCAGTCCATTCTCCACCACCCCCAGTCCACTCACCTCCACCACCCCCAGTCCACTCACCTCCACCACCAGTCCATTCTCCACCACCCCTAGTCCACTCACCTCCACCACCAGTCCATTCTCCACCACCCCCAATGCATTCTCCACCACCCCCAGTCCATTCACCTCCACCACCAGTCCACTCACCTCCACCACCAGTCCACTCACCTCCACCAGCCCCAATACATTCTCCACCACCACCTGTCCATTCTCCTCCACCACCTGTACCATTTAACTCACCACCACCACCAGTACACTCCCCTCCACCACCAGTACACTCTCCTCCTCCTCCACCTGCCTACTCTCCACCGCCACCTATCCAATCTCCACCACCACCTACACCAACTATTTCACCTCCTCCTCCAGAAGAAGAAGACATAATTCTTCCACCTCACTTTGGTTCTTCATATGCTTCACCTCCTCCACCAATCATTGCTGGCTACTAA 2286 0.4786 MQALGCTVILSLFVLSSFSSFSFALSNDEAAFIARRQLLHLHENEELTESYVESYKTDLKFDNPRLKHAYIALEAWKKAMYSDPSNFTSNWVGSDVCSYKGVFCAPALDDPETEVVAGVDLNHADIAGYIPPEIGLLSDLALLHINSNRFCGVLPKSLCNLKLMHELDVSNNRFVGPFPQSVICLQDIKYLDLRYNDFEGELPFELFNKTLDAIFLNNNRFVSTIPENLGNSPASVVVLANNHFNGCIPGSIGQMDKTLNEFVVVNNNLSGCLPVEIGKLRSVEVFDVSQNMLVGALPNTLNGLGKVEELSIANNKFTGSVSRSICSLPGLVNFTFSDNYFNEEEKDCVPQSRKDIELNDERNCIPNRPEQRGASECNAAISKAVDCSKTQCGHPSTPSHSNNPPSETPSEPEPKLTPSISNPPTETPSNPESPPQTPETPKTKPPTPETPKTQAPVTPQTPKPEPPPTPETPEVEPPVTPQTPNPEPPPTPETPEVQPPSTPQTPKPEPQPTPKAEPPPTPQTTIPQPPHSPETPKSPPLEDDPHNEAPRGRFRTPPPSVHSPTPLVQSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPLVHSPPPPVHSPPPPMHSPPPPVHSPPPPVHSPPPPVHSPPPAPIHSPPPPVHSPPPPVPFNSPPPPVHSPPPPVHSPPPPPAYSPPPPIQSPPPPTPTISPPPPEEEDIILPPHFGSSYASPPPPIIAGY* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1237 761 MobiDBLite consensus disorder prediction 537 551 - -
Lan3g1237 761 MobiDBLite consensus disorder prediction 388 761 - -
Lan3g1237 761 MobiDBLite consensus disorder prediction 405 536 - -
Lan3g1237 761 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 4 624 - -
Lan3g1237 761 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 619 758 - -
Lan3g1237 761 Pfam Leucine rich repeat N-terminal domain 72 104 IPR013210 -
Lan3g1237 761 MobiDBLite consensus disorder prediction 557 740 - -
Lan3g1237 761 MobiDBLite consensus disorder prediction 389 404 - -
Lan3g1237 761 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 4 624 - -
Lan3g1237 761 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 619 758 - -
Lan3g1237 761 Gene3D Ribonuclease Inhibitor 69 369 IPR032675 -
Lan3g1237 761 SUPERFAMILY L domain-like 77 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1237 Lan-Chr3 24519030 24522200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1237 4 560 Trihelix Transcription Factor Family AT3G19020 50.741 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1237 - - gmx:100780677 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1169 15 20314376 20317047 Lan3g1237 3 24519030 24522200 LSH
Lan14g0910 14 15633278 15635662 Lan3g1237 3 24519030 24522200 LSH