Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1236 ATGGCTATTCGTGTTACCTTCTCCTTCTCCGGCTATGTTGCAAACAACATCGTTTCCTCCGCCACCTCCCGAATATCCAAAAACCACTCCCTCCAAGAATGTTGGATCCGTTCTTGCCTCTTTGGAACGAACCACAGAACCGAACCAGATCCATCTACCGGAGTTCGAAGCTTCCATTCTGATTTTAGAAAATCGAAATCAAATTGCTGGGTCAAGAATTCCGCCTCCGCTGCTTACACCACCCTCGCCGGAGAAATTGTCGGTGATAACTGTAAGAACCCTATCGTGTTAGGTTTGATCTCGATGATGAAGTCAACGGTTTGTGTTTCTGGGTCTTCAACGGCGGCTATGGGTGTTTCGGGTATTTCTCCGTTTAAATCTTCTTCAATTATACCCTTCTTTCAGGGTTCCAAGTCGATTCCTTGTAATGAAAGTGAAGTTCATGAAAGTGTTGATTCCAATTTGAGTTCCAAGGACTTTGAGAGAAGTAGTTGGATTTCTCGGTTGTTGAACGTTTGTTCTGCTGATGCGAAAGCTGTGTTAACTGCTGTTACTGTTAGTTTTCTGTTTAAATCTTACTTGGCTGAACCAAGGTCTATTACTTCTGCTTCTATGAACCCAACTCTTGAAGTCGGTGATCGGATTTTAGCTGAGAAGGTTTCTTTCTTATTTAGAAAGCCAGATGTTTCGGATATTGTGATTTTTAAAGCACCACCTATTCTACAGGAATTTGGTTTTTCTTCATCCGATGTATTTATAAAAAGGGTTGTGGCTAAGGAAGGGGACTATGTTGAAGTTCGTGATGGAAAACTATTGGTGAATGGTGTTGCTGAAGAAGAGGAATTCGTTGTAGAACCTCTTGAATATGAGATGGATCAAGTGGTTGTGCCAGAAGGATATGTTTTTGTGATGGGAGACAATCGCAATAACAGTTTTGATTCTCATAACTGGGGTCCACTCCCTATCGAAAACATTGTCGGTAGATCCATGTTTCGGTACTGGCCTCCATCCAAACTATCTGACCCTGACACCTTTCTTCAGAAACCCACATCTGGAAACAATTCGGTGGTAGTTTCTTGA 1080 0.4231 MAIRVTFSFSGYVANNIVSSATSRISKNHSLQECWIRSCLFGTNHRTEPDPSTGVRSFHSDFRKSKSNCWVKNSASAAYTTLAGEIVGDNCKNPIVLGLISMMKSTVCVSGSSTAAMGVSGISPFKSSSIIPFFQGSKSIPCNESEVHESVDSNLSSKDFERSSWISRLLNVCSADAKAVLTAVTVSFLFKSYLAEPRSITSASMNPTLEVGDRILAEKVSFLFRKPDVSDIVIFKAPPILQEFGFSSSDVFIKRVVAKEGDYVEVRDGKLLVNGVAEEEEFVVEPLEYEMDQVVVPEGYVFVMGDNRNNSFDSHNWGPLPIENIVGRSMFRYWPPSKLSDPDTFLQKPTSGNNSVVVS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1236 359 PRINTS Bacterial leader peptidase 1 (S26A) family signature 193 209 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan3g1236 359 PRINTS Bacterial leader peptidase 1 (S26A) family signature 252 264 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan3g1236 359 PRINTS Bacterial leader peptidase 1 (S26A) family signature 296 315 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan3g1236 359 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 1 342 - -
Lan3g1236 359 Gene3D Umud Fragment, subunit A 190 346 - -
Lan3g1236 359 PANTHER SIGNAL PEPTIDASE I 1 342 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan3g1236 359 TIGRFAM sigpep_I_bact: signal peptidase I 179 335 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan3g1236 359 CDD S26_SPase_I 196 328 IPR019533 GO:0004252|GO:0006465
Lan3g1236 359 SUPERFAMILY LexA/Signal peptidase 192 339 IPR036286 -
Lan3g1236 359 ProSitePatterns Signal peptidases I signature 3. 301 314 IPR019758 GO:0004252|GO:0016021
Lan3g1236 359 Pfam Signal peptidase, peptidase S26 177 334 IPR019533 GO:0004252|GO:0006465
Lan3g1236 359 ProSitePatterns Signal peptidases I serine active site. 202 209 IPR019756 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1236 Lan-Chr3 24508568 24511006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1236 205 335 MADS-box Gene Family AT1G29960 35.338 3.79e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1236 K03100 - jre:109010298 472.626