LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan3g1211	ATGTCTGATAAAAAGAATAAATGCATGTGTGGTTGTAATGAAAGTGGCATTTCTTTAGCACTAGGTTTGTGGTCCTCAATCACTACCAGAACAGATAATCAGGAAACAATGGCCCTAGCAATAGGAAGAAGCTTCACTTTTCAGCCATGCTCTTTATTCAGCAATAAGGGTGTAGATAAAACTTCACCTGTGGGAAAATACTCCTGGCTGGGATCTGATGCAGCTGCTGCAAGAGCAGGAGTCACTCAAAGAAGAAGGCAGATTTCTGTTGCAGCACAACAGCGACCTACATGGCTTCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTGGCTGGAGATTTCGGGTTCGACCCACTTGGACTTGCAGAAGATCCTAAAAGCTTGAGGTGGTATGTGCAAGCAGAGCTGGTTCATTCCCGCTTTGCAATGCTTGGGGTCTTGGGTATTCTAGTCACAGATCTACTTCGTGTCACAGGACTTAGTAAGATACCAGTTTGGTATGAAGCCGGCGCAGCAAAGTACGAGTTTGCAAACACAGGAACACTCATCATTGTTCAACTACTTTTGATGGGGTTTGCTGAAACAAAAAGGTACATGGATTTCGTTAGTCCTGGATCTCAAGCTAAAGAAGGGTCCTTCTTTGGATTGGAAGCTTCACTAGAAGGCTTAGAGCCAGGGTACCCTGGGGGACCTCTGTTAAATCCTCTTGGCCTAGCTAAAGACATAAAAAATGCTCATGATTGGAAGCTTAAAGAGATTAAGAATGGGAGACTTGCAATGGTGGCAATCCTTGGCATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCATCTCTCTAATCCGTGGCATAAAACTATTATTCAGACACTTGCAAGTTCTACTTCTTAG	915	0.4404	MSDKKNKCMCGCNESGISLALGLWSSITTRTDNQETMALAIGRSFTFQPCSLFSNKGVDKTSPVGKYSWLGSDAAAARAGVTQRRRQISVAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLAEDPKSLRWYVQAELVHSRFAMLGVLGILVTDLLRVTGLSKIPVWYEAGAAKYEFANTGTLIIVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSTS*	305

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan3g1211	304	Gene3D	Chlorophyll a/b binding protein domain	97	304	-	-
	Lan3g1211	304	PANTHER	PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC	48	301	-	-
	Lan3g1211	304	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	48	301	IPR001344	GO:0009765\|GO:0016020
	Lan3g1211	304	SUPERFAMILY	Chlorophyll a-b binding protein	89	301	-	-
	Lan3g1211	304	Pfam	Chlorophyll A-B binding protein	104	272	IPR022796	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan3g1211	Lan-Chr3	24329915	24331900	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan3g1211	91	299	Chloroplast and Mitochondria Gene Families	AT3G61470	47.143	6.35e-61	192

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan3g1211	K08911		-	gmx:100804934	429.869