Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1207 ATGAGTTCCTCTGCCATTGAACACATTTCAGAATGTTTCATCAAGTTACAACACCCTATTGAAGACTCAAATCAAATATGGTATTTAGCACCCGGAGATATAGCTATGTTGTCTGCACATTACATCCAGAAGGGTCTGCTCTTTAACAAGCCTGCATTGCCATGCAATCAACAATTTTGTATCAATAATTTATTGGACAAACTCAAGCACTCCCTTTATCTTGCCCTTGTCCATTTCTATCCTTTGTTTGGCCGCCTTGTTACTCGAAAAACCGAAGATCCTCCCACTTATGTTATTTTCGTCGATTGTAGCAGTAATAGTCCTGGAGCTGGATTTATATATGCAACTTTAGATATGACTGTATCTGATATCCTCTCCCCTATTGATACTCCATCTATTGTTCAATCACTGTTTGATAATCACAAAGCAGTAAATCATGATGGTCACACTATGCCTTTGTTATCCATCCAAGTTACTGAACTATTGGATGGTGTTTTCATAGGATGTTCCATGAATCATAGTATTGGTGATGGCACTTCCTATTGGAATTTCTTCAATACATGGTCTGAGATCTTTCAATCTCTAGGCCAAGGGCATGATCATGATATTCTTATTTCGCACCAACCTATTCGCAATCGTTGGTTTCCGGAGAGTTGCGATCCACTTATCAATCTTCCATTTAAGCATCATGATGAGTTCATTAGCAGATTTGAAATACCCAAGTTGAGAGAAAGGATTTTTCACTTCACAGCAGAATCAATTGCAAAACTGAAAGCAAAGGCCAACGAAGAATCCAAAACAACCAAAATCTCTTCCTTCCAATCCTTGTCAGCACTTGTTTGGAGATCAATAACTCGTGCCCGAAACCTGCCACATGGTCAGGTAAGTACCTGCAAATTAGCCGCAAACAATCGAACACGAATCGAACCACCTATGGCGCAAGAGTACTTCGGCAATTTAGTACAGTTAGTGAGTGCAGGAACAACAATAAGGGAATTGCTTGAACACAATCTAGGATGGGCAGCATGGAAAGTGCACCTTGCTGTTACAAATCATAACAACACAATGGTGCAACAATCCTTCAATGACTGGTTACTGTCTCCTGTTGTCTATCAAGTCGGCCGCAACTTCGACCCGAATAGTGTGTTGATTAGTAGCTCACCAAGGTTCAACATGTATGGTAATGAATTTGGAATGGGAAAAGCTGTGGCAGTTAGAAGTGGTTATGCAAACAAATATGATGGTAAAATAACATCATATCCTGGCCATGAAGGAGGTGGAAGCATGGATTTGGAAGTGTGTCTTTTGCCACATATAATGGGTGCATTGGAATTGGATGAGGAGTTTATCAGTGCTGTTTCTGTTTCCAATTCCTTATACTAG 1383 0.4013 MSSSAIEHISECFIKLQHPIEDSNQIWYLAPGDIAMLSAHYIQKGLLFNKPALPCNQQFCINNLLDKLKHSLYLALVHFYPLFGRLVTRKTEDPPTYVIFVDCSSNSPGAGFIYATLDMTVSDILSPIDTPSIVQSLFDNHKAVNHDGHTMPLLSIQVTELLDGVFIGCSMNHSIGDGTSYWNFFNTWSEIFQSLGQGHDHDILISHQPIRNRWFPESCDPLINLPFKHHDEFISRFEIPKLRERIFHFTAESIAKLKAKANEESKTTKISSFQSLSALVWRSITRARNLPHGQVSTCKLAANNRTRIEPPMAQEYFGNLVQLVSAGTTIRELLEHNLGWAAWKVHLAVTNHNNTMVQQSFNDWLLSPVVYQVGRNFDPNSVLISSSPRFNMYGNEFGMGKAVAVRSGYANKYDGKITSYPGHEGGGSMDLEVCLLPHIMGALELDEEFISAVSVSNSLY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1207 460 Gene3D - 1 225 IPR023213 -
Lan3g1207 460 Gene3D - 235 445 IPR023213 -
Lan3g1207 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Lan3g1207 460 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Lan3g1207 460 Pfam Transferase family 7 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1207 Lan-Chr3 24301816 24303507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1207 48 435 Monolignol Biosynthesis Gene Families AT5G48930 26.683 4.07e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1207 - - gmx:100792511 691.034