Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1200 ATGACACACATAAAACCTGTTCATCCTAAAGTTCTTCTGACTCAGGTTTCTTCAACAATGGCCAACATCAAACACTTATATTATATCTTCCTATTCCTCCTCTCAAATTCATATCTCTCACTATCAACCCCACTCGACGCCGAAGCCTTACTTGCATTCAAATTAAAAGCTGATCTAAACAACAAACTCCAATATAATTCCTCTCTCACATTTTGCCACTGGCAAGGTGTACAATGCAACCATCACAAAATAACACGTCTTCTTCTACAACACTTAGATCTCGCTGGTGTTTTCGCACCAAACACGTTATCACGTCTTGATCAACTTCGAGTACTTAGTTTACATAATAACTCTCTCACTGGACCAATACCTGATCTTACTTCTCTCTATAATCTTAAATCACTCTTTCTTCATAATAACCGTTTCATTGGTTCACTTCCTCCTTCACTTTTCTCTCTTCACAGGCTTCGAACTCTTGATTTCTCTCATAATAACCTTTCTGGACCGATCTCGACTCGGTTCATTAACTTAGACCGACTCATCTACCTTCGACTCAGTTATAACAACTTCAACGGAACCGTTCCACCTCTTAACCAGTCTTCTCTCAAAACCTTCGACGTTTCCGGTAACAACCTTACCGGCGCTATTCCGGTAACCCCTACATTGTTCCGGTTTGAACCTTCTTCGTTCTCTTCTAACCCAGGCCTCTGCGGCGAGATCATCCATAAAGAATGCCACCCTACCGTACCTTTCTTCGGTAACAGAACGTCAGCGTCGCCGCCGGAGGCGGCGACGCGGAGCCACAGCGCGCAACTGCATGGTAGCGTTAACGGTTTAATCCGGCAGCCATACTCTAAAAAGCACAACCGGAAAGCATTGATCATCGGATTCTCTATCGGAATATTCGTTCTGATGGTTTCGCTATTTATCTTCGCCGTGACCGTTAAGAAAAACAGGAAGAAGAGGCGAAGTTCGGATGATTTGAGTTCCGATGCGGTGGCGACAGCGGAAGCAGCGGCGGTGATGCAAATGGAGCAAGAGAGGGAGTTAGAGGAGAAAATAAAGAGAGTGGAAGTAGCGAAAAGCGGGAACTTAGTATTCTGTGCGGGTGAGGTGCAGGTTTATACGGTAGAACAGTTAATGAAGGGTTCAGCGGAGCTATTAGGGAGGGGTAGTTTAGGAACAACGTATAAGGCAGTATTGGATAACCGTTTGATCGTGACCGTTAAAAGGCTTGATGCAGTGAAGATGGGTGCACATGCAAATAAACAAGTGTTCCAGCGTCACATGGAATCGGTTGGAGGGCTTCGGCATCCGAATTTGGTTCCACTTAGGGCTTATTTTCAGGCAAAGGAAGAAAGGTTAATTATCTATGATTATCAGCCTAATGGAAGTCTCTTCTCACTTATTCATGGTTCCAAATCAAGCAGGGCAAGGCCATTGCACTGGACATCATGCCTAAAAATAGCAGAGGACGTAGCACAAGGGCTGTCCTACATCCACCAAGCATGGAGACTGGTCCATGGCAATCTAAAGTCCTCAAATGTTCTTCTTGGACCTGATTTTGAGGCATGCATCACAGACTACTGCCTCACAGTATTGGCCAACCCATCCAGCTTTAGTGAAGATGTTGATTCTGCAGCCTATAGAGCTCCAGAAACTCGCAACCCAAATCACCAGCAAACCCCGAAATCGGATGTTTATTCTTATGGCATTTTGTTGCTAGAGATTCTAACTGGAAAATCTCCTTCTGAGATACCATTCTTGGTTCCTGGTGATATGTTAAGTTGGGTAAGGTCCATCAGGGATGACAATGGGGGTGAAGATAACAGAATGGAAATGCTTCTTCAGGTTGCTACAACTTGTAGCTTGGTCTCTCCTGAGCAGAGACCGACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTATTATTGGAAGATAGTGACTTGGATCTACTCACTAATGTCATGCCCTAA 1989 0.4444 MTHIKPVHPKVLLTQVSSTMANIKHLYYIFLFLLSNSYLSLSTPLDAEALLAFKLKADLNNKLQYNSSLTFCHWQGVQCNHHKITRLLLQHLDLAGVFAPNTLSRLDQLRVLSLHNNSLTGPIPDLTSLYNLKSLFLHNNRFIGSLPPSLFSLHRLRTLDFSHNNLSGPISTRFINLDRLIYLRLSYNNFNGTVPPLNQSSLKTFDVSGNNLTGAIPVTPTLFRFEPSSFSSNPGLCGEIIHKECHPTVPFFGNRTSASPPEAATRSHSAQLHGSVNGLIRQPYSKKHNRKALIIGFSIGIFVLMVSLFIFAVTVKKNRKKRRSSDDLSSDAVATAEAAAVMQMEQERELEEKIKRVEVAKSGNLVFCAGEVQVYTVEQLMKGSAELLGRGSLGTTYKAVLDNRLIVTVKRLDAVKMGAHANKQVFQRHMESVGGLRHPNLVPLRAYFQAKEERLIIYDYQPNGSLFSLIHGSKSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLTVLANPSSFSEDVDSAAYRAPETRNPNHQQTPKSDVYSYGILLLEILTGKSPSEIPFLVPGDMLSWVRSIRDDNGGEDNRMEMLLQVATTCSLVSPEQRPTMWQVLKMLQEIKEIVLLEDSDLDLLTNVMP* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1200 662 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Lan3g1200 662 Gene3D Ribonuclease Inhibitor 199 247 IPR032675 -
Lan3g1200 662 Gene3D Ribonuclease Inhibitor 43 198 IPR032675 -
Lan3g1200 662 Pfam Protein kinase domain 386 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1200 662 Gene3D Transferase(Phosphotransferase) domain 1 462 653 - -
Lan3g1200 662 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 24 652 - -
Lan3g1200 662 ProSiteProfiles Protein kinase domain profile. 382 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1200 662 Gene3D Phosphorylase Kinase; domain 1 339 460 - -
Lan3g1200 662 SUPERFAMILY Protein kinase-like (PK-like) 386 641 IPR011009 -
Lan3g1200 662 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Lan3g1200 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 652 - -
Lan3g1200 662 SUPERFAMILY L domain-like 66 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1200 Lan-Chr3 24240591 24244638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1200 46 654 Receptor kinase-like Gene Family AT5G43020 58.786 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan3g1200 Pkinase 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1200 - - gmx:100817172 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0894 14 15528181 15532353 Lan3g1200 3 24240591 24244638 LSH