Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1190 ATGGAGACACGTGGCAGCAAGAGGAAATCTAGTGCAACCAACGATTCCGATATTCAAGATCAAAACTCCATGAAGAAACAACGCGTTGTGTTGGGTGAAATTTCAAATTCAAACAATGTTTCTGTTTCTCCAATTTCGAATCCTGAGGTATCAGGAAGAGTGAGGAACTCTAGGATCAAAAGGGTTGCGGCTACAAGGAAGGGTCTTTCTTCTGTTGATTCCGATTTCGATACTGAGAATACTCCACCAGAAAGTTTCACTGCAAAATCAATAACCGAGGTCAAGTTCAGTGACCCACAGAACTGTGAAGCTTTTGTTGATGAGATCGATTCTTATCTTTACAGTATGGAGAGAGAGATAAAGAGAAGACCAAAGTTTAATTATATTGAAAGAGTTCAGCATGCTGTTACCACTAACATGAGAGGAATATTGGTGGATTGGATGGTTGAAGTTGCAGAAGAATATAAGCTTTTACCGGATACTCTTTTTCTTTCGGTTTCGTATGTTGATAGGTTTCTATCACTTAATCGTGTTTCTAAGTCCAAACTTCAATTGTTGGGAGTTTCTTCAATGCTCATTGCAGCTAAATATGAAGAAATGACACCGCCTCGTGTGGAAGATTTTGTGTTGATCACTGATAACACTTATGAGAAGTCAGAGGTTGTGAAAATGGAAGCTGATATACTCAAATCCCTGCGATTTGAAATGGGAAATCCTACTGCTAAGACTTTTGTTAGGAGATTTGCTGGGATTGGTTGTGAGAATAACAAAGCTAAAAAATTGCGGTTTGAGTGTTTATGTAACTATCTTGTTGAGCTAAGTTTGCTGGAGTATTGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCATCTGCTACATTTCTAGCTAGATATATCACTTGGCCTAAATTGCACCCTTGGACTGAAACCCTGTGTAAATTCACTGGATATAATGTTGCTGAGTTGAAAGAATGTGTTATTGTCTTACATGACTTGTTTTTGGCAAGAAGGGGAGGGTCTTACCCAGCCATTAGAGAAAAATACAAGCAACACAAGTTCAAAAATGTGGCACACCTACCTTCACCTCCACAACTACCAAGTTCTCTCTTTGAAGAAGAGTAA 1122 0.3895 METRGSKRKSSATNDSDIQDQNSMKKQRVVLGEISNSNNVSVSPISNPEVSGRVRNSRIKRVAATRKGLSSVDSDFDTENTPPESFTAKSITEVKFSDPQNCEAFVDEIDSYLYSMEREIKRRPKFNYIERVQHAVTTNMRGILVDWMVEVAEEYKLLPDTLFLSVSYVDRFLSLNRVSKSKLQLLGVSSMLIAAKYEEMTPPRVEDFVLITDNTYEKSEVVKMEADILKSLRFEMGNPTAKTFVRRFAGIGCENNKAKKLRFECLCNYLVELSLLEYCCLKFLPSLVAASATFLARYITWPKLHPWTETLCKFTGYNVAELKECVIVLHDLFLARRGGSYPAIREKYKQHKFKNVAHLPSPPQLPSSLFEEE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1190 373 CDD CYCLIN 239 330 IPR013763 -
Lan3g1190 373 SUPERFAMILY Cyclin-like 239 364 IPR036915 -
Lan3g1190 373 PIRSF Cyclin_A_B_D_E 2 372 IPR039361 -
Lan3g1190 373 ProSitePatterns Cyclins signature. 141 172 IPR006671 -
Lan3g1190 373 CDD CYCLIN 140 229 IPR013763 -
Lan3g1190 373 MobiDBLite consensus disorder prediction 1 28 - -
Lan3g1190 373 SUPERFAMILY Cyclin-like 98 236 IPR036915 -
Lan3g1190 373 Gene3D - 124 237 - -
Lan3g1190 373 SMART Cyclin_C_2 239 362 IPR004367 -
Lan3g1190 373 PANTHER CYCLIN-A3-1-RELATED 20 372 - -
Lan3g1190 373 SMART cyclin_7 146 230 IPR013763 -
Lan3g1190 373 SMART cyclin_7 243 331 IPR013763 -
Lan3g1190 373 Pfam Cyclin, N-terminal domain 112 236 IPR006671 -
Lan3g1190 373 PANTHER CYCLINS 20 372 IPR039361 -
Lan3g1190 373 Pfam Cyclin, C-terminal domain 239 361 IPR004367 -
Lan3g1190 373 Gene3D - 112 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1190 Lan-Chr3 24167995 24170266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1190 1 372 Core Cell Cycle Gene Families AT5G43080 50.538 1.84e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1190 K06627 - gmx:100787417 366.696