Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1176 ATGAACTTGATGATGAAGGATCCTACTATAGAGATTATTGAAGCTGAATATTGTCCTGAAGCAGTGATTGATTGGTATGAATGCACAGGAGGATCACAACATTACAAGAGTGTTGGCAATGACAAGAATAAATGTAGGAGAGATTTGTCTTCAAAAGCAAAGAAACATCTTTGTGCTTTGGGTTGGACTTTTTGGTATGCTAATAAGAAAACCAAGCAAGAGATTCGTTTCAAATCACCCAATGGAAAGAGCTATAACTCTCTCAAAACTGCATGCAAAAGGTGTATAGATGATGGAGTATGTGTTTCCTATAAGACAAGTGATCCTGTTGAAGTTGTTGAATCCTCTTTTGAAGTTGCACATACTGATATTACTACATTGGAGCCAGGACCTAGGGCGTATAAGAAGAGTAGGGTTCAAGCAAGGAGGTGCAACAAGAAAAGGAGGAGAGGTGATTCGTCGGAAATCGAGTTGCCAAGAAGGTGTTTCAAGAAAGTAAGGGAAAGCAAGTCGTCGGATGATGAGTGGACTCCAGAGTTAGTCAAAAGGATGACTCAGTGTACGAGGCTCAGAGTTGATGTGTCGAAAAAGAGACCTAAGGTTTTGCGATTTGGAAAAAGGGTGAGGAAAGAAAACTGTGGAGAACCATTGATGGATGGCCAAAAGGAAGCATTGGTTTCGCAGAATAGCGATTTTTCGAAGCAGGGGATTATTGACAATAGTCATCAATATCAAAGTGATAACATTTGTTCTATTTGTCAGGAAGTTGGTGAAGTAATGCTATGTGATAATTGTCCTTCTGTATTTCACTACACTTGTCTTGGTCTTGAGAAGGTTCCAGATGGTGATTGGTTTTGTTCCTCATGTTGTTGCAGACTATGCAACAGAACAAAGTGCAGAGAAGATTGTGAAGCAGATGTTATTTTCAATAGAGGCTCAGAACTTAAACGCTTGAATTTTAGAGGGTTCTATACTGTGACACTGGAGAGAAATAATGAGGTGATTTCTGTTGCTACCATGAGGATTTATGGTCAGAGAGTTGCAGAAGTACCACTTATTGCAACTATGAATAAGTTTAGAAGACAAGGAATGTGTAGAATTTTGATGAATGGAATTGAGAACTTGTTGAATCAGTTTGGAGTAAAGAGATTGGTTTTACCATCTGCTCATGATATGGTAGATACTTGGAGAAACTCATTTGGCTTTGCAAGGATGAATTGTGCAGATAAATTTCAATTAAGGGAATATACTTTTCTAGACTTTCAGGGCTCCATTATGTGCCATAAACCATTGATGAAATCTCAATTGGAACATGTCATGTGTTGA 1326 0.3854 MNLMMKDPTIEIIEAEYCPEAVIDWYECTGGSQHYKSVGNDKNKCRRDLSSKAKKHLCALGWTFWYANKKTKQEIRFKSPNGKSYNSLKTACKRCIDDGVCVSYKTSDPVEVVESSFEVAHTDITTLEPGPRAYKKSRVQARRCNKKRRRGDSSEIELPRRCFKKVRESKSSDDEWTPELVKRMTQCTRLRVDVSKKRPKVLRFGKRVRKENCGEPLMDGQKEALVSQNSDFSKQGIIDNSHQYQSDNICSICQEVGEVMLCDNCPSVFHYTCLGLEKVPDGDWFCSSCCCRLCNRTKCREDCEADVIFNRGSELKRLNFRGFYTVTLERNNEVISVATMRIYGQRVAEVPLIATMNKFRRQGMCRILMNGIENLLNQFGVKRLVLPSAHDMVDTWRNSFGFARMNCADKFQLREYTFLDFQGSIMCHKPLMKSQLEHVMC* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1176 441 CDD NAT_SF 328 386 - -
Lan3g1176 441 Pfam Acetyltransferase (GNAT) family 316 402 IPR000182 GO:0016407
Lan3g1176 441 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 238 316 IPR013083 -
Lan3g1176 441 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 227 304 - -
Lan3g1176 441 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 301 434 - -
Lan3g1176 441 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 11 165 - -
Lan3g1176 441 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 301 434 - -
Lan3g1176 441 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 227 304 - -
Lan3g1176 441 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 11 165 - -
Lan3g1176 441 SMART PHD_3 249 290 IPR001965 -
Lan3g1176 441 ProSiteProfiles Zinc finger PHD-type profile. 247 292 IPR019787 -
Lan3g1176 441 Gene3D - 317 433 - -
Lan3g1176 441 ProSitePatterns Zinc finger PHD-type signature. 250 289 IPR019786 -
Lan3g1176 441 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 317 402 IPR016181 -
Lan3g1176 441 SUPERFAMILY FYVE/PHD zinc finger 240 299 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1176 Lan-Chr3 23997655 23999628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1176 13 97 PHD Transcription Factor Family AT5G63900 45.882 2.90e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1176 - - lang:109342624 652.899