Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1166 ATGAAGTCCATGAATGATAGTAACAACACCACCGATGATGGAAATAATCATCATAACTGGTTGGGGTTCTCACTCTCACCCCACATGAATATGGATGTTACTTCTTCTGTCCTTTCTCATCATCACTATCACCAACAACAACAACAACAAGTTCAGGCTTCAGCAGCATCTTCTGTTTCCCACACTGTTCCCACATCCTTCTATTTAAACCCTTCTCACTCAGGGTTCTCTTATGGTGAAAATGGTGTATTTCATTCTCCTTTGACAGTTATGCCTCTCAAGTCAGATGGATCACTTTGCATCATGGAAGCTCTCACTAGATCACATACACAAGTGATGGTGCCAAGTTCTTCACCCAAACTCGAGGACTTTCTAGGTGGTGGTGCAACTATGGGAAGACATGAATATGTAGACCATGAAAGAGAAGCAATGGCTCTAAGCTTAGACAGCATCTACTACAACCAAAATGATCATGATTCTCAAGCCAACAGAGACCATTCACTTGATCTTCTTTCAGAATCCTTCAGTAATCTCCAATCACATCCATATTATTCAGGTCTTACTTACCAAAGAATGTATCAAGCAACACCTTCACATGAAGAACAAACCTATAAGGAAACTCATGTTGCAGTTTGTGGCTCTCAAATGTCTCGAATGACAGAATATTCAACTCATCAAGCTATGGAGCAACAAATGAACAGTAACATGGGGAGTGATGATCATGGAGCTACTGAGTCTCTTGGTACAGTAGGGTGTGGGGAGTTACAGTCTTTAACCTTATCCATGAGTCCTGGTTCTCAATCTAGCTGTGTAACAATACCAAGGAAGATTTCACCTTCTGGAACTGACTCAGTGGCTGTGGAGACAAAAAAGAGAGGGCCTGGTAAGCTTAGCCAGAAGCAACCAGTGCATAGGAAATCTATTGACACATTTGGTCAGAGAACTTCACAGTATAGAGGTGTCACAAGGCATAGGTGGACTGGAAGATATGAAGCACATTTGTGGGATAACAGCTGCAAAAAGGAAGGACAAACTAGGAAAGGAAGACAAGTATATTTGGGGGGTTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTTAAGTACTGGGGTCCTTCAACTCATATTAACTTTCCTTTGGAGAATTACCAATCAGAACTTGAAGGAATGAAAAACATGAGCCGGCAAGAATATGTTGCTCACTTGAGAAGAAAAAGTAGTGGATTTTCTAGGGGTGCTTCAATGTACAGAGGGGTGACAAGGCACCATCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCTGGGAACAAGGACCTCTACCTTGGAACTTTCAGCACTCAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATCAAATTCCGAGGCGTAAATGCAGTCACGAACTTCGACATAACTAGATACCATGTTGAAAGAATCATGGCTAGTAACACACTTCTTGCCGGCGAGCATGCAAGGAGAAACAAAGATAACGATCCAAGAACTGAGGCGATCGAGTTTAATAACAACAATGGTGTATCAAGCCAGGCCAATGTGGAAGCAGTTCAAGCTAGAAACAACAATGAAAATGGTTCAGACTGGAAGATGGCTTTGTTTCAGGAGCAACAACAGTCAAATAATATATGTGACCAAAAAGCTATCAATTGTGGAAATTATAGAAATTCTGCTTTCTCAATGGCCCTACAAGATCTCATTGGGATTGATTCAGTAGGTTCAAGCCAGCACATGGTGGATGAATCAAACAAGATAGTGACTCATTTTTCAAACCCTTCCTCTATGGTGACAAGTTTAAGCAGTTCCAGAGAGGCTAGCCCTGATAAAATGGGTCCCTCTCTTCTCTTTCCAAAGCCTCAAATGGAAACAAAGATTAGCAACAACACTATTGGTAGCACTGGTGGGGTTAGTTCTTGGTTTACCTCTCAAATAAGACCAGCTTCTGCTATCTCTCTCTCAAATTTGCCAGTTTTTGCTGCATGGAATGATACCTAG 2028 0.4191 MKSMNDSNNTTDDGNNHHNWLGFSLSPHMNMDVTSSVLSHHHYHQQQQQQVQASAASSVSHTVPTSFYLNPSHSGFSYGENGVFHSPLTVMPLKSDGSLCIMEALTRSHTQVMVPSSSPKLEDFLGGGATMGRHEYVDHEREAMALSLDSIYYNQNDHDSQANRDHSLDLLSESFSNLQSHPYYSGLTYQRMYQATPSHEEQTYKETHVAVCGSQMSRMTEYSTHQAMEQQMNSNMGSDDHGATESLGTVGCGELQSLTLSMSPGSQSSCVTIPRKISPSGTDSVAVETKKRGPGKLSQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQSELEGMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDITRYHVERIMASNTLLAGEHARRNKDNDPRTEAIEFNNNNGVSSQANVEAVQARNNNENGSDWKMALFQEQQQSNNICDQKAINCGNYRNSAFSMALQDLIGIDSVGSSQHMVDESNKIVTHFSNPSSMVTSLSSSREASPDKMGPSLLFPKPQMETKISNNTIGSTGGVSSWFTSQIRPASAISLSNLPVFAAWNDT* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1166 675 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 673 - -
Lan3g1166 675 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 673 - -
Lan3g1166 675 SMART rav1_2 317 389 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 SMART rav1_2 419 483 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 Gene3D AP2/ERF domain 316 385 IPR036955 GO:0003700|GO:0006355
Lan3g1166 675 Gene3D AP2/ERF domain 419 479 IPR036955 GO:0003700|GO:0006355
Lan3g1166 675 CDD AP2 316 383 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 ProSiteProfiles AP2/ERF domain profile. 419 477 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 SUPERFAMILY DNA-binding domain 418 478 IPR016177 GO:0003677
Lan3g1166 675 MobiDBLite consensus disorder prediction 270 305 - -
Lan3g1166 675 PRINTS Ethylene responsive element binding protein signature 318 329 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 PRINTS Ethylene responsive element binding protein signature 459 479 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 MobiDBLite consensus disorder prediction 270 285 - -
Lan3g1166 675 CDD AP2 418 479 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 MobiDBLite consensus disorder prediction 38 57 - -
Lan3g1166 675 Pfam AP2 domain 317 375 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 Pfam AP2 domain 420 469 IPR001471 GO:0003700|GO:0006355
Lan3g1166 675 SUPERFAMILY DNA-binding domain 316 385 IPR016177 GO:0003677
Lan3g1166 675 ProSiteProfiles AP2/ERF domain profile. 317 383 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1166 Lan-Chr3 23915652 23920189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1166 400 675 AP2-EREBP Transcription Factor Family AT4G37750 27.303 1.30e-15 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lan3g1166 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1166 K09285 - gmx:100798179 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0867 14 15331817 15336099 Lan3g1166 3 23915652 23920189 LSH
Lan3g0533 3 5388214 5391881 Lan3g1166 3 23915652 23920189 PCT
Lan3g1166 3 23915652 23920189 Lan3g0533 3 5388214 5391881 PCT