Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1146 ATGGTTTCCATTGATTTGGAATGGTTGTTTCCAATTCAGAGTTTCCCTTTTGTTTCAGTAATAATATTTACCTTGGTGGCTTTAATTGGAGGAGTATTGGGTTACTTATATGGGCCCTATTGGGGGGTAAGGAAGGTTCCAGGCCCACCATCCCTTCCACTTGTAGGACACCTTCCCTTGCTGGCTAAGTATGGTCCTGATGTGTTTTCAGTCCTTGCCAAGCAATATGGCCCAATATACAGATTTCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGTTGGAATAAAAAAATTTAAAGACATTTCAAACAGAAGTGTTCCTTCACCTATTTCTGCTTCCCCTCTTCACCAAAAGGGTCTCTTCTTTTCAAGGGATTCTCAATGGTCTAGCATGCGAAATACCATACTATCGGTGTACCAGCCTTCACACTTATCCATTTTAGTGCCGACAATGCAGTCATTCATAGAGTCTGCTACACAAAATCTTGACTCTCAACAAGAAGACATCACCTTTTCAAATTTATCCCTCAGATTAGCAACTGATGTTATTGGTCAAGCGGCATTTGGTGTCAACTTCGGCTTCTCTAATCCTCATTCAGTTTGTGATTCAATCAAGAATGTTAACAACAATGTAGGGGATGCAGCAGGAGCTAGTGATGAAGTAGCAGATTTCATCAATCAACATGTTTATTCTACAACCCAACTTAAGATGGACCTATCAGGTTCCTTCTCCATAATATTAGGCCTACTAGTCCCAATACTACAGGAGCCATTTCGACAGATTTTAAAGAGAATACCAGGCACCATGGACTGGAAAATTGAGCATACGAATCAGAAACTAACTGGTCGTCTTGATGAGATTGTTGAAAATAGAAGGAAAGATAGGACTCGAGGTTCAAAGGATTTCTTGTCACTCATACTAAACGCCACCGAATCTAAAACGGTATCAGAAAAGGTATTCACACCTGATTACATCAGTGCTGTTACTTATGAGCACTTGCTTGCGGGATCAGCAACGACTTCCTTTACCTTATCTACAGTTATCTATTTGGTTGCTGGACATCCAGAAGTTGAGGAAAAGCTTCTTGAGGAGATTGATAAGTTTGGTCCGAAAGATCAGATTCCTACTTCTCAAGACCTTAGTGACAAATTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACATTGTCTCTCCACTAGTTGCAAGAGAAACATCAAATGAAGTAGAAATAGGAGGTTACCTTCTTCCAAAGGGAACTTGGGTCTGGTTAGCACTTGGAGTTCTAGCAAAAGATCCTAAAAACTTTGCAGAGCCAGAAAAGTTCAAACCTGAGAGGTTTGCTCCAAACTGTGAAGAAATGAAAAGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTAGAGCTTGCATTGGTCAGAAGTTTTCCTTACAAGAGCTCAAGCTCTCTCTGATTCATTTATACCGGAAATACGTATTCCGGCATTCACCTGATATGGAAAATCCCTTGGAACTAGATTATGGCATGGTTCTCAACTTCAAGCATGGGGTCAAGGTCAGAACCATAAAAAGGACATAG 1617 0.4038 MVSIDLEWLFPIQSFPFVSVIIFTLVALIGGVLGYLYGPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDISNRSVPSPISASPLHQKGLFFSRDSQWSSMRNTILSVYQPSHLSILVPTMQSFIESATQNLDSQQEDITFSNLSLRLATDVIGQAAFGVNFGFSNPHSVCDSIKNVNNNVGDAAGASDEVADFINQHVYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIEHTNQKLTGRLDEIVENRRKDRTRGSKDFLSLILNATESKTVSEKVFTPDYISAVTYEHLLAGSATTSFTLSTVIYLVAGHPEVEEKLLEEIDKFGPKDQIPTSQDLSDKFPYLDQVIKEAMRFYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFAEPEKFKPERFAPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQELKLSLIHLYRKYVFRHSPDMENPLELDYGMVLNFKHGVKVRTIKRT* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1146 538 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PANTHER THROMBOXANE-A SYNTHASE 18 538 - -
Lan3g1146 538 SUPERFAMILY Cytochrome P450 40 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 Pfam Cytochrome P450 47 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 Gene3D Cytochrome P450 37 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan3g1146 538 PANTHER CYTOCHROME P450 FAMILY PROTEIN 18 538 - -
Lan3g1146 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1146 Lan-Chr3 23756453 23760770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1146 84 537 Cytochrome P450 AT2G26170 73.128 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1146 K20771 - gmx:100808297 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1728 3 29808613 29814022 Lan3g1146 3 23756453 23760770 PCT
Lan3g1146 3 23756453 23760770 Lan3g1728 3 29808613 29814022 PCT