Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1142 ATGTCTTTCCAACAGGTGTCACCGATAAATGCCACAATGGTGGCGGTTGACAAAGACAAGAATAGTGCTTATGCATTCCGTTGGGCAATTAATCATCTCGATAACCCTGTCATTATTGTTGTCCATGTCAAACACAAAAACCTTCATCATAATGGAGGCACAAATGTTCATCCACCTGATGAAGAAGACATGGCCAATGTTTTCAGTTCCTTGCGTGGAATGTGTAATCGTAAAGCTGTGGAGGTAAAAGAAGCTGTAATTGATGATATTGATATTGTTAGAGGACTTCAAGAATATGCACACAGGAATTTAATACATAGTATTGTTGTTGGTGCATCAAGGAACCCTTTGTCAAGTTTCAAAAAGTTGAAAGGATATGATGTACCAACAGCTATGCTCAAAACAGCCCCGGATTATAGTTCTGTATATGTGATTTCTAAATGGAAGATTGTTCAAGCTCGATCAGCGATTCGACAAATGGCAAACGCGCCTGTCCCACCGAAAAACTCATTTGTGCAGGCAATCCCATATAATGAATCAGAAAATGGAATAAGGACACCACCACATCATCCAAATGGAATGTCTTATGATAGGAACAATAATAATGTATCTAGAAGACCAAGGAGTGCAGGAAGTAATCAATCAATGGACCATATTATTGAAATAACATCGCGTTCAAGGCACGTGTCGATGGATGAAAAAGATATTTCAGGGCTTATGTCAATGAATTTAAGTAAACAGGATATGGATTTATCAGATTCCAGTGGTTATTCACCAATATCACAATCCACACGCGAAATGGAAGCTGAGATGAAGAGATTGAGGCTTGAGCTGAAGCAAACTATGGATATGTACAGCTCAGCTTGCAAACAAGCAATCTCAGCCAAAAATCAGGCCGAACAGATTCGACAATGGAAACTGAAAGAGGAACGTATGGTCGAAGAATCAAGGTTGTCTCAAAAGGCAGCTCTTGCAATGGCAGCACAGGAGAAGTTAAAAGCCTTAGCTGCATGGGAAGAAGCTGAGGAAGCAAGGAGGAAGGCTGAACAGGAAGCACAAAAAAGAAGGGAAGCAGAGAAAAAGGCTAAGAAAGAGTCAGAAGAGAAGGATCGGGTATTAAACGCGCTAGCTCGAAGTGATAATCGATATAGAAGATACACCATAGAGGAGATCGAAGCAGCTACAGATCAATTCTCGGCATCAAAGAAAATAGGTGAAGGAGGATATGGACCTGTGTATAAAGGCAAACTTGATCACACTCCAGTTGCAATCAAAATCCTCAGCCCTGATGCTTCTCAGGGAAGGAAGCAGTTTCAACAAGAGGTTGAGGTACTATGCCGCATAAGACATCCTAATATGGTACTCCTCCTTGGTGCATGTCCTGAGTATGGATGCTTGGTTTATGAACACATGGACAATGGTAGCTTAGATGACAGATTATTCAGAAGAAATAACAGTCCACCTCTTTCTTGGAGGTTAAGGTTCCAAATTTCTGCTGAGATTTCAACAGCACTCCTTTTCCTTCATCAAACAAAGCCAGAGCCTCTTGTGCATAGAGACCTTAAACCCGGAAACATTTTATTGGATCGGAATTATGTCAGTAAAATTGCTGATGTTGGTCTTGCAAGATTAGTCCCTCCTTCTGTAGCTGATTCTGTTACACAATATTACATGACTTCGGCTGCCGGAACATTTTGCTACATTGATCCTGAGTATCAAAGTTCAGGAATGTTAACACCAAAATCAGATATTTATTCATTTGGGATAATGCTACTGCAAATAATCACAGCTAAGCCTGCTATGGGACTTGCTCATCAAGTTAAAAGGGCAATCGAAAAGGACAAGTTTTCGGAGATACTCGACCCTGCTGTCACTGATTGGCCTGTTGAAAAGGCTCTTGAGTTTGCTAAATTAGCATTGGAATGTGCAGAGCTCAGCAAGAAGGACAGGCCAGATCTTGCAACAGTTGTATTGCCAACGCTTAGTCGGTTAAGAGATTTTGGAAATGCTTCACACAGGAATCGAGTTTTATGCGGCGTTGATCAAATGCATAGCTATGTTGACTACCATCTTTCTTCTACATCTCCAAATCTAAATTCAAAGACTCTAAGTACAAGCTAG 2121 0.4083 MSFQQVSPINATMVAVDKDKNSAYAFRWAINHLDNPVIIVVHVKHKNLHHNGGTNVHPPDEEDMANVFSSLRGMCNRKAVEVKEAVIDDIDIVRGLQEYAHRNLIHSIVVGASRNPLSSFKKLKGYDVPTAMLKTAPDYSSVYVISKWKIVQARSAIRQMANAPVPPKNSFVQAIPYNESENGIRTPPHHPNGMSYDRNNNNVSRRPRSAGSNQSMDHIIEITSRSRHVSMDEKDISGLMSMNLSKQDMDLSDSSGYSPISQSTREMEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKLKEERMVEESRLSQKAALAMAAQEKLKALAAWEEAEEARRKAEQEAQKRREAEKKAKKESEEKDRVLNALARSDNRYRRYTIEEIEAATDQFSASKKIGEGGYGPVYKGKLDHTPVAIKILSPDASQGRKQFQQEVEVLCRIRHPNMVLLLGACPEYGCLVYEHMDNGSLDDRLFRRNNSPPLSWRLRFQISAEISTALLFLHQTKPEPLVHRDLKPGNILLDRNYVSKIADVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQSSGMLTPKSDIYSFGIMLLQIITAKPAMGLAHQVKRAIEKDKFSEILDPAVTDWPVEKALEFAKLALECAELSKKDRPDLATVVLPTLSRLRDFGNASHRNRVLCGVDQMHSYVDYHLSSTSPNLNSKTLSTS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1142 706 ProSiteProfiles Protein kinase domain profile. 398 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1142 706 Gene3D Phosphorylase Kinase; domain 1 365 470 - -
Lan3g1142 706 Gene3D Transferase(Phosphotransferase) domain 1 471 677 - -
Lan3g1142 706 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 117 - -
Lan3g1142 706 Gene3D HUPs 2 137 IPR014729 -
Lan3g1142 706 SMART serkin_6 398 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1142 706 Coils Coil 331 375 - -
Lan3g1142 706 Pfam Protein tyrosine and serine/threonine kinase 400 657 IPR001245 GO:0004672|GO:0006468
Lan3g1142 706 MobiDBLite consensus disorder prediction 182 213 - -
Lan3g1142 706 MobiDBLite consensus disorder prediction 193 213 - -
Lan3g1142 706 SUPERFAMILY Protein kinase-like (PK-like) 382 657 IPR011009 -
Lan3g1142 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Lan3g1142 706 CDD STK_N 14 147 - -
Lan3g1142 706 Pfam Universal stress protein family 13 118 IPR006016 -
Lan3g1142 706 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 11 688 - -
Lan3g1142 706 MobiDBLite consensus disorder prediction 348 370 - -
Lan3g1142 706 Coils Coil 264 284 - -
Lan3g1142 706 PANTHER OS02G0152300 PROTEIN 11 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1142 Lan-Chr3 23736121 23741108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1142 84 668 Receptor kinase-like Gene Family AT5G12000 57.610 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan3g1142 PK_Tyr_Ser-Thr 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1142 - - qlo:115974974 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1142 3 23736121 23741108 Lan3g1142 3 23736121 23741108 ECH
Lan15g1104 15 19913179 19917742 Lan3g1142 3 23736121 23741108 LSH