Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1136 ATGGGTTTAAGCACAACCAATGATGATTCTTCTTCTACTTCTTCTTCGGAGATTCACATCCCAGAAGAGATAGATTGGCACATGCTTGACAAATCCAAGTTTTTCTTCCTAGGTGCAACCTTATTCTCTGGTGTTTCAGCTTTTCTTTATCCAATGGTTGTGTTAAAGACACGCCAACAATGTTCTTCAACACAATACTCTTGTCTCAACATGTCTTGTGCCATTATGCGCTATGAAGGGTTCAGAGGTTTTTACAAAGGTTTTGGAACTTCTTTGATGGGAACAATCCCTGCTCGTGCATTTTACATGGCTTCTCTTGAAGTTACAAAGAGTAATGTTGGCACTACTCTTCTTGATTTAGGATTTTCAGATACAACAGCTAGTGCTATTGCTAATGCTGCTGCTGGTGTCACTTCTGCTATGGCTGCACAATTGGTTTGGACACCAATCGATGTTGTGAGCCAAAGACTTATGGTTCAAGGTTGCAATAATAGCACCAACACAAAAAATGTACTAACCAATCTTAACTCTGAGAATTACAGGAATGGCTTTGATGCATTCAGGAAAATTCTATGTGCTGATGGAGCTAAAGGACTCTATAGAGGGTTTGGGATTTCTATATTGACTTATGCACCATCTAATGCAGTTTGGTGGAGTTCTTACTCTATTGTCCATAGGCTCATTTGGGATACTTTTGGTAGCTACATGGGTAAAAGGGATGATGGGAATTTGGTAAATAGAGGGTATGGTTTTAGGCCTGATTCTAAGGCAATGGTGGCTGTGCAAGGATTGAGTGCTGTTATGGCAAGTGGGGTATCAGCAATTGTGACAATGCCATTTGATACAATCAAGACAAGGTTGCAAGTGTTGGATAGTGAAGAAAGTGGGAGAAAGAGGCCTTTAACTTTTGTGCAAACTGTGAAGAGTTTGGTGAATGAAGGTGGATTGCTTGCTTGTTATAGAGGAATGGGGCCAAGGTGGGCTTCAATGTCAATGTCTGCAACAACCATGATTACAACCTATGAGTTTTTGAAACGGGTGTCCACAAAGAGTGAAGAGTAA 1062 0.4068 MGLSTTNDDSSSTSSSEIHIPEEIDWHMLDKSKFFFLGATLFSGVSAFLYPMVVLKTRQQCSSTQYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARAFYMASLEVTKSNVGTTLLDLGFSDTTASAIANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCNNSTNTKNVLTNLNSENYRNGFDAFRKILCADGAKGLYRGFGISILTYAPSNAVWWSSYSIVHRLIWDTFGSYMGKRDDGNLVNRGYGFRPDSKAMVAVQGLSAVMASGVSAIVTMPFDTIKTRLQVLDSEESGRKRPLTFVQTVKSLVNEGGLLACYRGMGPRWASMSMSATTMITTYEFLKRVSTKSEE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1136 353 PRINTS Mitochondrial carrier protein signature 44 62 IPR002067 GO:0055085
Lan3g1136 353 PRINTS Mitochondrial carrier protein signature 85 103 IPR002067 GO:0055085
Lan3g1136 353 PRINTS Mitochondrial carrier protein signature 136 158 IPR002067 GO:0055085
Lan3g1136 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 257 347 IPR018108 -
Lan3g1136 353 SUPERFAMILY Mitochondrial carrier 27 344 IPR023395 -
Lan3g1136 353 Gene3D Mitochondrial carrier domain 32 353 IPR023395 -
Lan3g1136 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 227 IPR018108 -
Lan3g1136 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 4 352 - -
Lan3g1136 353 Pfam Mitochondrial carrier protein 128 229 IPR018108 -
Lan3g1136 353 Pfam Mitochondrial carrier protein 260 350 IPR018108 -
Lan3g1136 353 Pfam Mitochondrial carrier protein 42 112 IPR018108 -
Lan3g1136 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 352 - -
Lan3g1136 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 112 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1136 Lan-Chr3 23688032 23689425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1136 17 353 Chloroplast and Mitochondria Gene Families AT5G26200 63.501 7.72e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1136 K15121 - gmx:100784202 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1097 15 19891406 19893366 Lan3g1136 3 23688032 23689425 LSH
Lan14g0849 14 15188557 15190383 Lan3g1136 3 23688032 23689425 LSH