Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1134 ATGGCAGAGAACAAAGTAGAAGTGGTGGTGGCAATTTCAAATGCTGGTGGAGAAAACCATGACTCCAAAGTGATTGTTGAATCGCCTCAGACAAAAGTTTTCAATGACAATGAGGTTTTTACAAAGTCACCACCTTTACACTGTGCTTCCCCTGAGATAAGGTTCACTCCTAGTCCAAACAAGACACCAAGAGTTCCTACTAATGGCAACCTTATCAGAAGAAAATCACTTGCAAGGTTAGTGTATTCAAAACCCAAATCAAGATTTGGTGAACAACCTTATACATTGGATGGTAGTGTCTTAGAAGAAAATAGTATTTCAACTTTGCAAGAACAGTTGGCTGTTAATTCACCATATAGGAACTCGATCGGTAAAGCACAGCTTAGTAAAAAGCCCGGGCCGGTTACTAGAACCGCCTCTACTAATTCCACCATCACGCCTAAGACGTCGTTGATTGCGTCTCCTGGCCTTGGTGGAAAGGATGAGGGTGAACTTATTTACATGAAAGTGGAATTGAGCAAAGGGAAACGGAAGAGACTAACGATTAAGGTTTTGAACGATTTCTTTGTGTTTTTGTTTATTCTGGCTAACCTGGTGGCTAGCTTAACAATTGAGAAAGTTAAAAGGACAAATATTTGGGGTCTAAGGATTTGGAGGTGGTGTGTGCTTTTCATGGTGACCTTTTGTGGCATGTTAGTTACAAGATGGTTCATGCATTTTGTTGTTTTCTTGATTGAAAAGAACTTTTTGTTGAGGAAAAAGGTGCTGTATTTTGTCCACGGACTAAAGAAAGTTGTCCATGTCTTCATTTGGCTCGGTTTAGTTCTCCTCACGTGGGAGCTGTTGATCCAGCAATCTGAATTGGCTACAAAAGTTCTGGATGGTGTAACTTGGACTCTTATTTCTCTGCTCATAGGAGCATTCCTTTGGTTGTTAAAGACATTGCTGCTCAAGATTTTGGCATCAAATTTCCATGTCAAATCTTTCTTTGATCGAACTCAAGAAGCGATCTTCCATCAGTATGTTTTACAGACTCTCTCTGGGCCTCCACTCATGGAAGAGGCCGAGAAGGTCGGGGGATCGCAAAGTATTGGTCAATGTAGTTTCAGGAGTACAACGAGTAAAGGCGCTACAAAGAAAGAGGTAATTGATATGGCAACACTCCACAGGATGAAACAAGAGAAAGTTTCTGCATGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAGGACTCTCCACAATCTCTAATTCACTAGATGAAAGTTTCTACGATGGAGGAACTGAACAAATAGATAAAGAGATTTCAAATGAAATGGAAGCAATTGCCGCAGCCTATCACATTTTCAGGAATGTTGCCAATTCCACAATCTCTAAGTCATGCTACATGTACATTGATGAGTATGATCTCCGGAGGTTCATGATTAAGGAAGAAGTGGATCTGGTATTTCCCCAACTAGAACAAGCAGAGATGGGACAAATTACCATAAAGTCTTTAACGGGCTGGGTGTTGAAGGTATATCAGGAACGTAAAGCATTGGCACACGCCTTAAGTGACACCAAAACAGCGGTTAAACAATTAGGCAAGCTTGTGACTGGAATCCTAGTAGTGGTGTCCATAATAGTATGGCTTCTACTGATGGGGATTGCAACAACAAAAGTTCTTGTATTCCTCTCTTCGCAGCTAGTACTTGCAGCTTTCATGTTTGGAAACACGTGCAAGAATATTTTTGAAGCTATCATCTTCGTGTTTGTGATGCATCCATTTGACGTTGGTGATCGATGTGTTGTAGATGGTGTTGAGCTGCTAGTTGAAGAAATGAATATACTGACAACAGTCTTCTTGAAGACTAATAACGAAAAGGTTTACTTTCCAAACTCAGCGCTGGCCACAAAACCGATTAGCAATTATCACAGAAGCCCTGACATGGTTGAAATTGTAGAGCTCTCCATTGATTTTCTGACACCCATGGAGAAGATTGGGGTATTGAAAGAAAAAATAAAAGGGTACTTGGAGAGCAACCCACAATTCTGGCATCCTAATCACAACTTAGTAGTGAAGGATATTGAAAATGTAAATAAGATTAAGATGAATCTGGCTGTTATCCACACAATGAACTTCCAAGAATTTTCTGAGAGGAACAAGAGAAGAAGTGAGCTAGTGATGGAAGTAAAGAAAATAATTGAAGAGCTCAATATCAGATACTACCTTCTTCCTCAAGGTGTTCATCTCAGACATATGGAACCAGATACAACTTTACCCAAGTGA 2271 0.4025 MAENKVEVVVAISNAGGENHDSKVIVESPQTKVFNDNEVFTKSPPLHCASPEIRFTPSPNKTPRVPTNGNLIRRKSLARLVYSKPKSRFGEQPYTLDGSVLEENSISTLQEQLAVNSPYRNSIGKAQLSKKPGPVTRTASTNSTITPKTSLIASPGLGGKDEGELIYMKVELSKGKRKRLTIKVLNDFFVFLFILANLVASLTIEKVKRTNIWGLRIWRWCVLFMVTFCGMLVTRWFMHFVVFLIEKNFLLRKKVLYFVHGLKKVVHVFIWLGLVLLTWELLIQQSELATKVLDGVTWTLISLLIGAFLWLLKTLLLKILASNFHVKSFFDRTQEAIFHQYVLQTLSGPPLMEEAEKVGGSQSIGQCSFRSTTSKGATKKEVIDMATLHRMKQEKVSAWTMKILVDAVMNSGLSTISNSLDESFYDGGTEQIDKEISNEMEAIAAAYHIFRNVANSTISKSCYMYIDEYDLRRFMIKEEVDLVFPQLEQAEMGQITIKSLTGWVLKVYQERKALAHALSDTKTAVKQLGKLVTGILVVVSIIVWLLLMGIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKTNNEKVYFPNSALATKPISNYHRSPDMVEIVELSIDFLTPMEKIGVLKEKIKGYLESNPQFWHPNHNLVVKDIENVNKIKMNLAVIHTMNFQEFSERNKRRSELVMEVKKIIEELNIRYYLLPQGVHLRHMEPDTTLPK* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1134 756 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 746 IPR016688 -
Lan3g1134 756 Gene3D - 589 638 IPR023408 -
Lan3g1134 756 SUPERFAMILY Sm-like ribonucleoproteins 579 638 IPR010920 -
Lan3g1134 756 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 3 746 - -
Lan3g1134 756 PIRSF Memb_At2g17000 3 754 IPR016688 -
Lan3g1134 756 Pfam Mechanosensitive ion channel 530 735 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1134 Lan-Chr3 23673525 23676457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1134 40 745 Mechanosensitive Ion Channel Family AT5G12080 58.042 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1134 K22048 - gmx:100803107 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1094 15 19871774 19875379 Lan3g1134 3 23673525 23676457 LSH