Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1131 ATGTTTCTCTTCTCTTCCACCATGGCCTCTCATCTCTTCAACCTTTCTCTATCTTCTCAACCAAAACTCTCTTTCAACCACACTCCTATTCCTCATTTTCACTTCATTACTATTCTAAGCTCTAAACGCTGTCGTATCACTAACCGCAACTATCTTCGCCGTCGATTTCTCCGGCCACATTTCTCTGTATCCAACTCCTCTCAAACTCAGACTTCCTCGCCGGTTCTACTCGACGTCACTGGAATGATGTGCGGCGCGTGCGTTTCACGTGTCAAGAACATCTTATCCGCTGATGACCGAGTCGACTCGGTCGTGGTCAACATGTTGACCGAGACCGCCGCCGTCAAGCTGAAACGAAACGAGGAGGAGGTGGAAGGTGTTGCCGAGGGACTTGCTCGGAGATTGAGCGATTGCGGGTTTCCGACGAAGAGAAGGGCGTCGGGGTTGGGAGTGGCGGAGAATGTTAAGAAGTGGAAGGAGTTGGTGAAGAAGAAAGAGGAACTAGTTGTTAAGAGCCGTAACCGTGTTGCTTTTGCTTGGACTTTGGTTGCGTTGTGCTGTGGATCTCATGCTTCTCATATTTTTCATTCTTTGGGGATTCATATTGCTCATGGACCGATTTGGGAGATTCTTCATAGTTCATATTTCAAAGGTGGTTTAGCTTTGGGGGCTCTATTGGGACCAGGACGAGACTTACTGTTAGATGGTCTAAATGCATTTAAGAAGGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCTTTGTCATCAGTTTGATTTCACTACTTAACCCCGGTCTGGCATGGGATGCATCATTTTTTGATGAACCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACGTTCTTTAGAGGAAAAGGCTAGGATTCAGGCATCAAGTGATATGAATGAACTTCTATCACTCATATCTACTCAGTCAAGACTTGTAATTACTTCATCAGAAGGTTCATCGTCTAGTGACAGTGTGCTTTCCTCTAACTCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGACTCAGTTTTGGTGTTACCTGGAGAAACTATTCCTATAGATGGAAGGATTGTATCAGGTAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAATCACTTCCTGTATTTAAGGAGGCAGGCCTCACAGTTTCAGCTGGTACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCCAACACAATGATATCCAAGATTGTACGCATGGTTGAGGATGCTCAATCGCGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGACCATTTGTATACAGTGTAATGACTCTATCAGCAGCAACATTTGCATTTTGGTATTTTATTGGGTCGAACATATTTCCTGATGTTTTGCTCAATGATATTGCCGGCCCTGAAGGAGATCCTTTGCTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCACTGGGTCTTGCCACACCGACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTATTAGAGGAGGGGATGTGCTCGAACGCTTGGCCAACGTAAATTATATTGCTCTGGACAAGACAGGAACCCTCACCAAAGGAAAACCGGTTGTCTCTGCTATAGGCTCTATTCATTATGGAGAGTCGGAAATTCTTCAGATTGCAGCCGCAGTGGAGAAAACAGCATCTCATCCAATAGCGAAGGCTATTGTCAATAAAGCTGAATCATTAGAGTTGATTCTTCCACTTACAAGAGGGCAGTTGGTTGAACCAGGTTTTGGAACCTTGGCAGAAATAGATGGGCGGTTGGTTGCGGTTGGATCTTTACAATGGGTCAATGAACGCTTCCAGACAAGAGTGGACCCATCTGATTTGATGAATTTGGAACATACTTTGATGAATCATTCCTCAAATATGACATCTTCAAACTATTCGAAAACTGTTGTCTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATTGTGCGCGAAGATGCAGAATCTACTGTAACAAGGCTTAAGCAGAAGGGGATTAAAATGGTCCTCTTATCCGGAGACAGGGAAGAAGCAGTAGCAACTATAGCAGAGACAGTTGGAATTGAAAGTGATTTTGTCAAAGCTTCACTCTCTCCACAGCAGAAATCTAAATTCATTTCATCTCTGAAAGCTGCTGGACATCGTGTTGCGATGGTAGGTGATGGGATAAATGACGCACCCTCTTTGGCCGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCCATTATACTTCTTGGGAACAAAGTTTCACAAATTGTTGATGCACTAGACCTTGCACAGACAACTATGGCAAAAGTGTACCAAAATTTGTCTTGGGCCGTAGCCTACAATGTTGTTGCCATTCCCATTGCTGCTGGTGTATTACTTCCTCATTATGAATTTGCTATGACACCTTCACTTTCAGGAGGAATGATGGCTCTGAGCTCCATCTTCGTGGTTAGCAACTCACTGCTTCTACAACTTCATGGGTCTAAGACTACCACAAAGCCCTCACTCTAG 2643 0.4431 MFLFSSTMASHLFNLSLSSQPKLSFNHTPIPHFHFITILSSKRCRITNRNYLRRRFLRPHFSVSNSSQTQTSSPVLLDVTGMMCGACVSRVKNILSADDRVDSVVVNMLTETAAVKLKRNEEEVEGVAEGLARRLSDCGFPTKRRASGLGVAENVKKWKELVKKKEELVVKSRNRVAFAWTLVALCCGSHASHIFHSLGIHIAHGPIWEILHSSYFKGGLALGALLGPGRDLLLDGLNAFKKGSPNMNSLVGFGSIAAFVISLISLLNPGLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGSSSSDSVLSSNSICVEVPTDDIRVGDSVLVLPGETIPIDGRIVSGRSVVDESMLTGESLPVFKEAGLTVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFWYFIGSNIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLANVNYIALDKTGTLTKGKPVVSAIGSIHYGESEILQIAAAVEKTASHPIAKAIVNKAESLELILPLTRGQLVEPGFGTLAEIDGRLVAVGSLQWVNERFQTRVDPSDLMNLEHTLMNHSSNMTSSNYSKTVVYVGREGEGIIGAIAISDIVREDAESTVTRLKQKGIKMVLLSGDREEAVATIAETVGIESDFVKASLSPQQKSKFISSLKAAGHRVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKVSQIVDALDLAQTTMAKVYQNLSWAVAYNVVAIPIAAGVLLPHYEFAMTPSLSGGMMALSSIFVVSNSLLLQLHGSKTTTKPSL* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1131 880 SFLD Haloacid Dehalogenase 526 808 - -
Lan3g1131 880 ProSiteProfiles Heavy-metal-associated domain profile. 74 144 IPR006121 GO:0046872
Lan3g1131 880 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 330 848 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan3g1131 880 Pfam Heavy-metal-associated domain 77 140 IPR006121 GO:0046872
Lan3g1131 880 SUPERFAMILY HAD-like 541 863 IPR036412 -
Lan3g1131 880 Gene3D - 534 807 IPR023214 -
Lan3g1131 880 SUPERFAMILY Calcium ATPase, transduction domain A 337 426 IPR008250 -
Lan3g1131 880 Gene3D - 66 146 - -
Lan3g1131 880 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 247 867 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lan3g1131 880 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 545 634 IPR023299 GO:0000166
Lan3g1131 880 SUPERFAMILY Calcium ATPase, transmembrane domain M 277 537 IPR023298 -
Lan3g1131 880 PANTHER ATP7, ISOFORM B 70 869 - -
Lan3g1131 880 Gene3D - 554 687 IPR023299 GO:0000166
Lan3g1131 880 ProSitePatterns E1-E2 ATPases phosphorylation site. 545 551 IPR018303 -
Lan3g1131 880 Pfam haloacid dehalogenase-like hydrolase 539 770 - -
Lan3g1131 880 SFLD p-type atpase 526 808 IPR044492 -
Lan3g1131 880 PRINTS P-type cation-transporting ATPase superfamily signature 376 390 - -
Lan3g1131 880 PRINTS P-type cation-transporting ATPase superfamily signature 543 557 - -
Lan3g1131 880 PRINTS P-type cation-transporting ATPase superfamily signature 679 690 - -
Lan3g1131 880 PRINTS P-type cation-transporting ATPase superfamily signature 701 711 - -
Lan3g1131 880 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Lan3g1131 880 CDD P-type_ATPase_HM 175 866 - -
Lan3g1131 880 CDD HMA 77 141 IPR006121 GO:0046872
Lan3g1131 880 Gene3D - 299 430 - -
Lan3g1131 880 Pfam E1-E2 ATPase 336 523 - -
Lan3g1131 880 SUPERFAMILY HMA, heavy metal-associated domain 74 130 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1131 Lan-Chr3 23648189 23656925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1131 238 868 Primary Pumps ATPases AT1G63440 37.072 3.76e-117 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1131 K17686 - gmx:100127402 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1131 3 23648189 23656925 Lan3g1131 3 23648189 23656925 ECH