Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1128 ATGATGCACATGACCTTCTATTGGAGCAAAAACGTGACTCTCCTCATCGATTCATGGAGAACCGATTCGTGGTTGAGTTATGTATTGAGTTTGGTGGCGTGCATCGTCGCCTCCGTTTTCTATCAATACCTTGAAAATCGCCGTATTCGGTTGAAGTTATTGGCCGCCGGAAAGTCATCTCCGGCTACGACGGCGGAGATTCAGGTACCTCTGCTGCGACGGAAGGTAATCGGCGGAGTGAGGGTTGGTGGAGCGGTGCTGTTTGGGTTGAGTTCGGCGATTGGGTATTTGTTGATGTTGGCGGTGATGTCATTCAATGGAGGAGTGTTTGTGGCTATTGTGGTGGGTCTTGCGTTTGGTCACTTTGTTTTTAGAAGTGAGGGTGAAGAAGGTTCACTTGTTGTTGATAGTTCTTGTGCTTGTGCTTAA 429 0.4825 MMHMTFYWSKNVTLLIDSWRTDSWLSYVLSLVACIVASVFYQYLENRRIRLKLLAAGKSSPATTAEIQVPLLRRKVIGGVRVGGAVLFGLSSAIGYLLMLAVMSFNGGVFVAIVVGLAFGHFVFRSEGEEGSLVVDSSCACA* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1128 142 Pfam Ctr copper transporter family 4 124 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lan3g1128 142 PANTHER CTR FAMILY COPPER TRANSPORTER 1 142 - -
Lan3g1128 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 142 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1128 Lan-Chr3 23620708 23621432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1128 1 142 Inorganic Solute Cotransporters AT5G20650 51.370 6.89e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1128 K14686 - gmx:100805457 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1128 3 23620708 23621432 Lan3g1128 3 23620708 23621432 ECH
Lan1g0438 1 3519747 3520567 Lan3g1128 3 23620708 23621432 ECH