Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1115 ATGGGAATATATCTCAGCACCCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGATCATCTCAGATATGGCTTATCATCCATGCAAGGGTGGCGTTCGACAATGGAAGACGCTCATGCTGCACATACTGATCTGGATGAGTCCACTTCGTTTTTTGGTGTGTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCACCAACAAGTGCTCAAAAGTGAAGCATATGCGGCTGGAGATATCGGAACCTCTCTTCAGAAAGCTTTCTTAAGAATGGATGACATGATGCATGGCCAAAGGGGGTGGAGGGAATTAGCAACCTTGGGGGATAAGATAAACAAGTTTAGCGGGATGATTGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAATGAACAAGCTGACGATTGGGTTTTTGAGGAGGGGCCTCATTCTGACTTTGCCGGACCAACTTCTGGAAGCACTGCCTGTGTTGCTGTGATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGACTCTCGTTGTGTGATATCTCGGAAGGGTCAGGCGTACAATTTGTCTAGAGACCACAAACCTGATCTTGAAATTGAGAAGGAAAGAATCGTAAAAGCTGGTGGTTTTATTCATGCAGGGCGGATTAATGGCAGTTTAAATCTTGCGAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATATCTTCCTGCTGAAAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTTGAGCTTTGTGATGAAGATGAATTTATGGTGCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTTGATTTCATTCATGAGCAACTGCACTCAGAAACCAAACCTTCTGCAGTTTGTGAAAGAGTACTCGATCGGTGCTTGGCACCATCAACTGCCCGTGGCGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAGAAACATGCTCAGTCAAGTGCACCATCAGAAGAGCAATCCTCTTCAAATGGACAAGTTGAATCTGAACCAAAACAAGAGACAAGTGAAACTTAG 1083 0.4321 MGIYLSTPKTEKFSEDGENDHLRYGLSSMQGWRSTMEDAHAAHTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSEAYAAGDIGTSLQKAFLRMDDMMHGQRGWRELATLGDKINKFSGMIEGLIWSPRSSDGNEQADDWVFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERIVKAGGFIHAGRINGSLNLARAIGDMEFKQNKYLPAEKQIVTANPDINTVELCDEDEFMVLACDGIWDCMSSQQLVDFIHEQLHSETKPSAVCERVLDRCLAPSTARGEGCDNMTMILVQFKKHAQSSAPSEEQSSSNGQVESEPKQETSET* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1115 360 MobiDBLite consensus disorder prediction 330 360 - -
Lan3g1115 360 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Lan3g1115 360 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Lan3g1115 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Lan3g1115 360 Pfam Protein phosphatase 2C 140 313 IPR001932 -
Lan3g1115 360 Pfam Protein phosphatase 2C 23 102 IPR001932 -
Lan3g1115 360 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Lan3g1115 360 MobiDBLite consensus disorder prediction 330 353 - -
Lan3g1115 360 CDD PP2Cc 23 329 IPR001932 -
Lan3g1115 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Lan3g1115 360 SMART PP2C_4 12 327 IPR001932 -
Lan3g1115 360 SMART PP2C_SIG_2 28 329 IPR001932 -
Lan3g1115 360 Gene3D - 1 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1115 Lan-Chr3 23492721 23498758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1115 1 341 PP2C-type Phosphatase Gene Family AT2G25070 78.592 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1115 K17499 - gmx:100787778 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1115 3 23492721 23498758 Lan3g1115 3 23492721 23498758 ECH
Lan10g0930 10 13942016 13946450 Lan3g1115 3 23492721 23498758 LSH
Lan10g0930 10 13942016 13946450 Lan3g1115 3 23492721 23498758 PCT
Lan3g1115 3 23492721 23498758 Lan3g1115 3 23492721 23498758 PCT
Lan3g1115 3 23492721 23498758 Lan10g0930 10 13942016 13946450 PCT