Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1099 ATGAAACTTCTTCTTATAGTTTTCATTCTTCACCAACTTATCCGGGTTCTAGTAGCTGCAGACCCTCCTGTTTCTTCACCTCAACCTGCACACATTACTACACTTTCTACCTCCATGCCTGCCTTTTCCCCTGGTATTCATGTAGGGGTAGAAGACAAACACAAACACTCACACAAGAAATTGGTAATAGCTCTTGTTGTAGTTAGCACTGCACTTGCAGCACTCGTTTTGAGTTTGTTATGCTTTTGGATTTATCAACATACCAAGCACCCTTCAAAATCCAATAAGAAGAAAAATGCCCAAAGATCAGATGCAGAGAAAGGGGTAGCTGCAGCACCATCTTTGAGTAAATTCAGTTCTGTGAAGTTGGTTGGTATGAAAGGTTCTGTTCCAATAATTGATTATAAGCAAATAGCAAAAGACACCAATAATTTCAAGGAAAGTAATATCTTGGGCGAGGGTGGTTTTGGATGTGTTTACAAGGCTTGTTTGGATGATAACTTGGATGTTGCTGTCAAGAAACTGCACTGTGAAACTCAAATTGCTGAGAGAGAATTTGAGATGATTTTGCAGAATGAGGTGGACTTGTTAAGTAAAATTCAGCATCCAAATATAATTTCTTTGCTGGGTTGTAGCATTGATGGGAACACAAGGTTTATTGTGTATGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCACATGAGGATGAAGATTGCTCTTGACACAGCAAGGGGATTAGAATATCTGCATGAACATTGTTATCCTCCAGTGATACACAGAGATATGAAATCTTCTAATATTCTTTTAGATGCAAAATTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAATTGATGGGTCCCAAAGCAAGAAGAACATCAAACTTTCAGGCACATTGGGATACGTAGCACCAGAGTATCTTTTAGATGGTGAATTAACTGATAAAAGTGATGTGTATGCTTTTGGGGTGGTGCTACTTGAGCTCCTATTAGGAAGAAAGCCTGTGGAAAAAGTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATACCACAGCTCACAGATAGATCCAAGCTTCCAAACATTGTGGATCCAGTGATTAGGAATACAATGGATCCCAAGCACTTATACCAGGTTGCTGCTGTAGCTGTGCTGTGTGTGCAACCTGAACCAAGTTACAGGCCATTGATCACAGATGTTCTCCACTCTCTTGTCCCTCTTGTTACCACTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGCCTAAACATGTCTCCTCTGCTGACCCACCTTTGAATACCAGTCATTAA 1356 0.41 MKLLLIVFILHQLIRVLVAADPPVSSPQPAHITTLSTSMPAFSPGIHVGVEDKHKHSHKKLVIALVVVSTALAALVLSLLCFWIYQHTKHPSKSNKKKNAQRSDAEKGVAAAPSLSKFSSVKLVGMKGSVPIIDYKQIAKDTNNFKESNILGEGGFGCVYKACLDDNLDVAVKKLHCETQIAEREFEMILQNEVDLLSKIQHPNIISLLGCSIDGNTRFIVYELMQNGSLEAQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCYPPVIHRDMKSSNILLDAKFNAKLSDFGLAIIDGSQSKKNIKLSGTLGYVAPEYLLDGELTDKSDVYAFGVVLLELLLGRKPVEKVAPAQCQSIVTWAIPQLTDRSKLPNIVDPVIRNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVTTELGGTLRVSQVPKHVSSADPPLNTSH* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1099 451 Gene3D Transferase(Phosphotransferase) domain 1 225 428 - -
Lan3g1099 451 ProSiteProfiles Protein kinase domain profile. 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1099 451 ProSitePatterns Protein kinases ATP-binding region signature. 151 174 IPR017441 GO:0005524
Lan3g1099 451 Gene3D Phosphorylase Kinase; domain 1 106 224 - -
Lan3g1099 451 PANTHER BNAA04G14780D PROTEIN 21 440 - -
Lan3g1099 451 Pfam Protein kinase domain 146 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1099 451 SUPERFAMILY Protein kinase-like (PK-like) 124 419 IPR011009 -
Lan3g1099 451 SMART serkin_6 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1099 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Lan3g1099 451 PANTHER OS01G0750732 PROTEIN 21 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1099 Lan-Chr3 23337648 23342193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1099 32 365 Receptor kinase-like Gene Family AT1G80640 50.592 1.11e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lan3g1099 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1099 - - gmx:100785380 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1099 3 23337648 23342193 Lan3g1099 3 23337648 23342193 ECH
Lan10g0939 10 14036230 14040155 Lan3g1099 3 23337648 23342193 LSH
Lan10g0939 10 14036230 14040155 Lan3g1099 3 23337648 23342193 PCT
Lan3g1099 3 23337648 23342193 Lan3g1099 3 23337648 23342193 PCT
Lan3g1099 3 23337648 23342193 Lan10g0939 10 14036230 14040155 PCT