Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1087 ATGTTTGCTGCAGAAAATGGCCTCAAAGGAGACCCAAGACTTGAAGCAATTTCTCAAGCAATAAGAGTTGTTCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACGACATTGTTGTTGGATCATAAGGCGTTCAAACACACGGTCGACATATTTGTCGATCGTTACAGAGACATGAACATTTCCGTTGTTGCAGGAATTGAAGCAAGGGGTTTCATGTTTGGTCCTTCAATTGCATTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTCACAAGCTACCAGGTGAAGTAATTTCAGAAAAGTATGTTCTAGAATATGGAACTGATTGTTTGGAGCTTCACGTTGGCGCTGTCCAGCCCGGTGAACGGGTCATAGTTATTGATGATTTGATAGCTACAGGTGGAACTCTGAAAGCAGCTATCAGTCTTCTAGAACGTGTTGAAGCTGAAGTAGTGGAATGTGCTTGTGTGATCGGTGTACCTGATGTTAAGGGACAGTGCAGGCTTATTGGAAAGCCACTTTATGTCCTTGTGGAGCCCCGGGAAGTAGATGAATGTTTTTAA 576 0.4288 MFAAENGLKGDPRLEAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKHTVDIFVDRYRDMNISVVAGIEARGFMFGPSIALGIGAKFVPLRKPHKLPGEVISEKYVLEYGTDCLELHVGAVQPGERVIVIDDLIATGGTLKAAISLLERVEAEVVECACVIGVPDVKGQCRLIGKPLYVLVEPREVDECF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1087 191 Pfam Phosphoribosyl transferase domain 52 165 IPR000836 -
Lan3g1087 191 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Lan3g1087 191 Gene3D - 5 184 IPR029057 -
Lan3g1087 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lan3g1087 191 CDD PRTases_typeI 51 183 IPR000836 -
Lan3g1087 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 188 - -
Lan3g1087 191 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lan3g1087 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1087 Lan-Chr3 23251563 23255337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1087 1 148 PRT Gene Family AT5G11160 84.459 5.07e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1087 K00759 - gmx:100499904 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1087 3 23251563 23255337 Lan3g1087 3 23251563 23255337 ECH
Lan15g1040 15 19445286 19448199 Lan3g1087 3 23251563 23255337 LSH
Lan3g1087 3 23251563 23255337 Lan15g1040 15 19445286 19448199 PCT
Lan3g1087 3 23251563 23255337 Lan3g1087 3 23251563 23255337 PCT
Lan15g1040 15 19445286 19448199 Lan3g1087 3 23251563 23255337 PCT