Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1080 ATGCCAAAAATGAAGCACCTACTGCGTAAGCTTCACATCGGTGGCACCACCATCAATAACCACCACCAACAACCATTACCAGCACCGGAACCAGAACCGGACCCAATCCCCGTCCTCATCGCCACCACGACTCCGTCCTCTTCCTCCTCCGCTTTACCGTCGCCCACTCCAATCGCTCCCGATCCGAACCCTAATAACGCGAATAATAATTTTCATTTGTTGGAGGAGGAAGAGTTTGAGATGCAATTGGCTATGGCGATTAGCGCTTCCGATTCCGATGTTGTTAAGAAAGACCCTGAATCTGCTCAGATCGATGCTGCTAAACAGATCAGTCTTGGTTATGAAGCTTCCGATTCTGATACACAAGCACTTGCTCAGTTTCAATCTCTTCGTTATTGGAACTACAATGTTGTTGATTACAAAGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACCTCCTCCAATTTGATTGAACGAGGAAGGATGCCACTGTTGGCAGACTTGCAAACTGCACCTGTATCTAGAAATGTTGACTGTGAAGTGATTTTGGTGAACCGCAGAAATGATATTGAGTTGAAGCAGCTTGAGGAAAAAGCCTGTGCTTTATTCAATGAGTGTTTTGTTTCTGAACTTGGATTAATTTTGAGTGGCTTACTTCAGAAACTTGCTGATATTGTTGTTGATAGAATGGGTGGTCCAGTTGGTAATGCTGATAATATCATGAGAAGGTGGGCTATGAGGAGTCGTGAGTTACGGAATTTTTCAAGAACCATTGTTCTTCCCCTTGGTCGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTGCTTTTTAAAGCACTTGCTGATAGGATTAATATTCCCTGCATGTTGGTCAAAGGGAGCTATTACACAGGAAGTGATGATGGAGCCGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATCATTGATTTGATGGGTGCGCCTGGCACTCTTATTCCTGCAGAGGTACCCAGCAGTCAGCTCCAAAACTATGGTTTTAATGTTATGGGTTGTGCAGAGATTGCTGGGCTTCATAACAGCATGCATCCAATGCTTGATGATGGAACTGGAGTGTTGGGAGTCTTGTCTGATCTTGGTAGAATTCCAACAGCGGGGTGGGTCCAGGCAGAAGAATTATTAGATATGGGGAGTCAAACAAAATCGAATGAAATAAATCATGTCGAAGTAAGTGAAACGGAGAGATTTAAACATACAAAAGCATATGAATTCTCATCACATATAGAAGCATCACCTGCAGAAAAGATGCATGTAAAAAATGTCTCCAAGTATGTTCTCAGTGCAGCAAAGAATCCAGATTTTGCTCAAAAACTGCAAAATGTTCTATTAGAAAGTGGTGCATCACCTCCTCCTAACCTTTTTTCAGATATCAATTCTCAAGATACAGGTAAAGAAAAAGTAAATGAAAAAAATGATGTTCAAGCTGACCCAAAGAGGTTGTTATTCAGTCATGAGAAGTCTCTCATGTCATCTCAAGGGGTGGGCTGTTCCAGTGATACTAGGTTATGTCAATCTGCTGACCAGTTATCTGAACTGGAAATAGAATTGCATACAGATGGCATTAGATTTTATAATTCCTCACAGAGTGATCAAAGAAGGAAGGGGTTTGTAACTGTTTCTGATGGAGTGAATGATCTAGGGCAATCTAATGCAGTAGTTCTCAATTCAATTTCTATCAATCCACAGAAGATGTGTAAAGAAAAGTGTATTAAGTCTTCCTTGCCCAAGACAGCTGTTTCTTGCGAAAGACATAATGGGATTGACTGTGTTTGTGATAATGATGAAAATGGTCTTAAAAATAAAGTTGGGGCATCTTTTGAGAACATTGAATTTGGGAAAGATTCAGCCATTCAAGTAAATGAGACGGCCAGTGAGGATTGTAACCTATATGATGGTAAAAGCAAGAAAGTTAACTCAGTAATGGGTGAAGGCATAGAATGGGAAGTTCAATGGGAGGATCTTTGTATTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTACCGTGCTGATTGCAATGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCGGGTGGTGCACTAGCTCAGTTCAAATCTGAAATTGAGATCATGTTAAGGCTGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGCCCACCAAATTTCTCTATCTTGACCGAGTTTCTTCCAAGAGGAAGTTTATATAGGCTATTGCATCGACCCAATATTCGAATTGATGAAAAGAGGCGGTTGCGTATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCACACAAGCCATCCTCCCGTTGTCCATAGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAGCATTGGGTTGTTAAGGTCTGTGATTTTGGTCTGTCACGGACAAAACACCATACGTATTTGTCATCAAAATCTTGCGCTGGAACGCCTGAATGGATGGCGCCAGAAGTCTTGAGGAACGAGCCAGCTAATGAGAAGTGTGATGTGTACAGTTTTGGCGTGATCTTGTGGGAGTTGGCTACCACAAGAATCCCATGGAAAGGTTTGAACCCGATGCAGGTTGTGGGAGCTGTTGGATTCCAAAACAAACGGCTAGAAATTCCAGAAGAAATTGATCCAGTTGTAGCACAAATAATACGTGATTGCTGGCAAGTGGAGGCACACTTGCGGCCATCATTCTCCCAGCTGATGTCTCAACTTTCCCGTCTTCAACATCTGGTTGTCGGAAAAACAAGCTCAACACACTAA 2817 0.4214 MPKMKHLLRKLHIGGTTINNHHQQPLPAPEPEPDPIPVLIATTTPSSSSSALPSPTPIAPDPNPNNANNNFHLLEEEEFEMQLAMAISASDSDVVKKDPESAQIDAAKQISLGYEASDSDTQALAQFQSLRYWNYNVVDYKEKVMDGFYDVYGITSSNLIERGRMPLLADLQTAPVSRNVDCEVILVNRRNDIELKQLEEKACALFNECFVSELGLILSGLLQKLADIVVDRMGGPVGNADNIMRRWAMRSRELRNFSRTIVLPLGRLDVGLSRHRALLFKALADRINIPCMLVKGSYYTGSDDGAVNLIKADDGSEYIIDLMGAPGTLIPAEVPSSQLQNYGFNVMGCAEIAGLHNSMHPMLDDGTGVLGVLSDLGRIPTAGWVQAEELLDMGSQTKSNEINHVEVSETERFKHTKAYEFSSHIEASPAEKMHVKNVSKYVLSAAKNPDFAQKLQNVLLESGASPPPNLFSDINSQDTGKEKVNEKNDVQADPKRLLFSHEKSLMSSQGVGCSSDTRLCQSADQLSELEIELHTDGIRFYNSSQSDQRRKGFVTVSDGVNDLGQSNAVVLNSISINPQKMCKEKCIKSSLPKTAVSCERHNGIDCVCDNDENGLKNKVGASFENIEFGKDSAIQVNETASEDCNLYDGKSKKVNSVMGEGIEWEVQWEDLCIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGGALAQFKSEIEIMLRLRHPNVVLFMGAITRPPNFSILTEFLPRGSLYRLLHRPNIRIDEKRRLRMALDVAKGMNYLHTSHPPVVHRDLKSPNLLVDKHWVVKVCDFGLSRTKHHTYLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATTRIPWKGLNPMQVVGAVGFQNKRLEIPEEIDPVVAQIIRDCWQVEAHLRPSFSQLMSQLSRLQHLVVGKTSSTH* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1080 938 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Lan3g1080 938 CDD STKc_MAP3K-like 677 923 - -
Lan3g1080 938 MobiDBLite consensus disorder prediction 462 478 - -
Lan3g1080 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Lan3g1080 938 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 64 935 - -
Lan3g1080 938 Pfam Ethylene-responsive protein kinase Le-CTR1 125 330 - -
Lan3g1080 938 MobiDBLite consensus disorder prediction 462 491 - -
Lan3g1080 938 Pfam Protein tyrosine and serine/threonine kinase 673 923 IPR001245 GO:0004672|GO:0006468
Lan3g1080 938 MobiDBLite consensus disorder prediction 17 69 - -
Lan3g1080 938 Gene3D Transferase(Phosphotransferase) domain 1 750 933 - -
Lan3g1080 938 PRINTS Tyrosine kinase catalytic domain signature 745 758 IPR001245 GO:0004672|GO:0006468
Lan3g1080 938 PRINTS Tyrosine kinase catalytic domain signature 784 802 IPR001245 GO:0004672|GO:0006468
Lan3g1080 938 PRINTS Tyrosine kinase catalytic domain signature 831 841 IPR001245 GO:0004672|GO:0006468
Lan3g1080 938 PRINTS Tyrosine kinase catalytic domain signature 850 872 IPR001245 GO:0004672|GO:0006468
Lan3g1080 938 PRINTS Tyrosine kinase catalytic domain signature 894 916 IPR001245 GO:0004672|GO:0006468
Lan3g1080 938 ProSiteProfiles Protein kinase domain profile. 671 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1080 938 MobiDBLite consensus disorder prediction 40 54 - -
Lan3g1080 938 Gene3D Phosphorylase Kinase; domain 1 664 748 - -
Lan3g1080 938 PANTHER SERINE-THREONINE PROTEIN KINASE 64 935 - -
Lan3g1080 938 SUPERFAMILY Protein kinase-like (PK-like) 661 923 IPR011009 -
Lan3g1080 938 SMART serkin_6 671 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1080 Lan-Chr3 23134823 23149954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1080 565 937 MAP Kinase Kinase Kinase AT5G11850 68.901 2.28e-175 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan3g1080 PK_Tyr_Ser-Thr 2.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1080 K04424 - gmx:100779137 1300.8