Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1078 ATGGGAAAAAAATGGTTTTTCTTCTATTTTATGAGTACTCTTGTGTTGTGTAAAGTGTGTTTAGGTGGTGTTGAATTTATTGGCAAGGTTTCACCTGGTTTTCAAGGTTCTCAAATGACTTGGATTAACATTGATGGCAAGTTCCTTATGTCAGATAATGGTGGAGAATTTGCCTTTGGATTTATCACCACTCCATATGATCCTACAAAGTTTCTACTAGGAGTTGTTCATGTTGCTACTTCTACTTTGGTTTGGTCTGCAAATAGAGCAATTCCTGTTTCCAATTCAGACAATTTTGTGTTTGATGACAAGGGTAATGTCTTGTTACAGAAAAGTGGAACTGTGATTTGGTCTACAAATACAAGTGGCAAAGGAGTTTCTTCAATGGAATTGCAAGAAACTGGAAATTTGGTGTTGCTAGGGAATGATAACAGCACAATAATATGGCAGAGTTTCAACCATCCAACAGATACCTTGTTGCCAAAACAAGACTTCACAGAAGGAATGAAACTTGTTAGTGAACCTAGCTCTAACAACTTCACCTATGTTCTTGAGATCAAATCTGGCATTGTGAATCTATATGCTAATTTCAAAACTCCACAGCCTTATTGGACTATGCAGACCGATAACCGAAAAATTGTAAACAAAGATGGTGATGTGGTTTCTTCAGCAGTTCTTAATGCAAATTCTTGGAGGTTCTATGATGAAAACAAGTCTTTGGTATGGCAATTCATTTTCTCTGCTGATCAAGGTACAAATTCAACTTGGATTGCAGTTTTGGGAAGTGATGGTTTTATCACTTTCTCTAATCTTGAAAGTGGTGGGTCTAATGGTGCTTCAACAACAAGAATACCACAAGGTTCTTGTAGTACACCAGAATCTTGTGATCCATATAACATATGCATAGGGGATGGAAAGTGTAGCTGCCCTTCTGTTCTTAACTCTGCTGGTCCCAATTGCACACCAGGGTTTGTCTCTTCTTGTGATAACAATGAAAAATCCATTGAGTTTTACAAAGCTGATGATGGACTCAATTACTTTGCACTTCAATTTCTTAAACCTTTCTCAAAAACAGATTTTGCTGGTTGCCAAACGTTGTGCCACAGAAACTGTTCATGTCTTGCTATGTTCTTCCAGAAAAGTTCAGGGAACTGTTTTCTGTTAGACAGTATAGGAAGCTTTGAAAAATCAAGCAATGATTCTGGTTTTGTTTCTTACATTAAGGTCTCAAGTGATGGAGGAATTGGCACAAGTGGCAGTAGTAGCAGCAATAAGCACACTATAGTTGTTGTGATAATTGTTATACTAACATTGCTTGTCATTTCTTGCCTTCTATTTTTAGGACTTAGATACCACAGGAAGAAGAAAAAATTGGCTAACTCCCCTAGAGATAATTCAGAAGATGACAATTTCTTGGAGAATTTAACCGGTATGCCGATTCGCTACACCTACAAAGATCTAGAAACTGCAACTAATAACTTCACAGTGAAGCTTGGTAAAGGGGGTTTTGGCTCAGTTTATAAGGGAGTTCTACCAGATGGAACTCAACTAGCTGTGAAACAGTTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGTAGCATTCATCATCTTCATTTGGTAAGGCTTAGAGGATTCTGTGCTGAAGGAACTCATAGACTTCTTGCTTATGATTTCATGGCTAATGGCTCATTAGACAAATGGATATTCAAGAAAACCAATGGCCAATTTGTGTTGGATTGGGACACAAGGTTTAACATAGCTCTTGGAACAGCAAAAGGACTTGCTTATTTGCATGAAGATTGTGACTCAAAGATAGTACACTGTGATATCAAGCCAGAGAATGTGCTTCTTGATGATCATTTCATGGCCAAGGTTTCAGATTTTGGTCTAGCTAAACTCATGAATAGAGAACAAAGCCATGTTTTCACAACACTAAGAGGCACAAGAGGCTATCTTGCACCAGAATGGATAACAAACTATGCTATATCAGAGAAAAGTGATGTATATAGTTATGGTATGGTATTACTAGAGATAATTGGTGGAAGAAAAAACTATGACCCTTCTGAGACTTCAGAGAAATCACACTTCCCAAGTTATGCATTTAAGATGATGGAAGAAGGGAAACTTAGAGATATAGTGGATTCAAAGTTGGTAACTGAGGGTCATGATCATAGAGTGCATACTGCTATAAAAGTTGCACTATGGTGCATACAAGAAGATATGTCTATGAGGCCTTCAATGACCAAAGTTGTGCAAATGTTAGAGGGTCTTTGTACTGTTCCTAAGCCACCACACACTTCTCTAATGGGCTCTAGGTTTTTTTCAACTGTGTTTAAGTCCACTAGTGATGAGGTTAACTCTTCAGGTCCATCAGATTGTAATAGTGATGCATATCTCTCTGCTGTTAGGCTTTCAGGTCCAAGATAG 2451 0.3803 MGKKWFFFYFMSTLVLCKVCLGGVEFIGKVSPGFQGSQMTWINIDGKFLMSDNGGEFAFGFITTPYDPTKFLLGVVHVATSTLVWSANRAIPVSNSDNFVFDDKGNVLLQKSGTVIWSTNTSGKGVSSMELQETGNLVLLGNDNSTIIWQSFNHPTDTLLPKQDFTEGMKLVSEPSSNNFTYVLEIKSGIVNLYANFKTPQPYWTMQTDNRKIVNKDGDVVSSAVLNANSWRFYDENKSLVWQFIFSADQGTNSTWIAVLGSDGFITFSNLESGGSNGASTTRIPQGSCSTPESCDPYNICIGDGKCSCPSVLNSAGPNCTPGFVSSCDNNEKSIEFYKADDGLNYFALQFLKPFSKTDFAGCQTLCHRNCSCLAMFFQKSSGNCFLLDSIGSFEKSSNDSGFVSYIKVSSDGGIGTSGSSSSNKHTIVVVIIVILTLLVISCLLFLGLRYHRKKKKLANSPRDNSEDDNFLENLTGMPIRYTYKDLETATNNFTVKLGKGGFGSVYKGVLPDGTQLAVKQLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGTHRLLAYDFMANGSLDKWIFKKTNGQFVLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPSETSEKSHFPSYAFKMMEEGKLRDIVDSKLVTEGHDHRVHTAIKVALWCIQEDMSMRPSMTKVVQMLEGLCTVPKPPHTSLMGSRFFSTVFKSTSDEVNSSGPSDCNSDAYLSAVRLSGPR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1078 816 CDD B_lectin 45 155 IPR001480 -
Lan3g1078 816 ProSiteProfiles Bulb-type lectin domain profile. 156 281 IPR001480 -
Lan3g1078 816 SMART blect_4 40 155 IPR001480 -
Lan3g1078 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 816 - -
Lan3g1078 816 ProSiteProfiles Bulb-type lectin domain profile. 40 152 IPR001480 -
Lan3g1078 816 PIRSF SRK 4 812 IPR024171 GO:0004674
Lan3g1078 816 CDD STKc_IRAK 498 765 - -
Lan3g1078 816 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Lan3g1078 816 Gene3D Phosphorylase Kinase; domain 1 455 566 - -
Lan3g1078 816 CDD PAN_AP_plant 324 409 - -
Lan3g1078 816 Gene3D Transferase(Phosphotransferase) domain 1 567 771 - -
Lan3g1078 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Lan3g1078 816 Pfam D-mannose binding lectin 82 165 IPR001480 -
Lan3g1078 816 ProSiteProfiles PAN/Apple domain profile. 328 411 IPR003609 -
Lan3g1078 816 ProSiteProfiles Protein kinase domain profile. 492 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1078 816 SMART serkin_6 492 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1078 816 SUPERFAMILY Protein kinase-like (PK-like) 472 763 IPR011009 -
Lan3g1078 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 208 IPR036426 -
Lan3g1078 816 Pfam Protein kinase domain 496 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g1078 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 816 - -
Lan3g1078 816 Gene3D - 43 154 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1078 Lan-Chr3 23091752 23094704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1078 438 774 Receptor kinase-like Gene Family AT5G20050 45.506 1.28e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan3g1078 Pkinase 6.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1078 - - gmx:100791158 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1034 15 19419866 19422354 Lan3g1078 3 23091752 23094704 LSH
Lan3g1078 3 23091752 23094704 Lan15g1034 15 19419866 19422354 PCT
Lan3g1078 3 23091752 23094704 Lan3g1078 3 23091752 23094704 PCT
Lan15g1034 15 19419866 19422354 Lan3g1078 3 23091752 23094704 PCT