Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1077 ATGAGTTCAAGTCTGAGTAACCATCTTCTCTTGAGTTTACAACGACCATCTACCTCAACTGTCAATCCCAACGACCACACTGTTGCATGTTCAGATATAGGTCCAATTGCAGTGATTCCAAGTAGCAAAAGGAGAGAACTTATATGCAGCTTAGCCACTTTGCCATGTCTTCTTCCCTTAACTCGTGTCCTGGATTGTCTCCCAGCTAATGCTATTCCGTTAGATAGAAAAGAATATGTTCTCATCAAACAAGAGTTGAGGAAGGTTTTGTCAAAGGCAAAAGCTGCAGGTGTGCTTCGTTTGGTTTTTCATGATGCAGGAACTTTCCAATTAGATGACAATACAGGTGGTATGAATGGTTCTATAATCTATGAACTTGAAAGATCTGAAAATGCTGGCTTGAAAAAATCAGTGAAGGTTTTGCAGAAGGCGAAAACTGAGATAGATGTCATCCAACAAGTATCCTGGGCGGACATGATTGCTGTGGCCGGAGCTGAAGCAGTCGAATTATGTGGAGGTCCACCAATCCAAGTGTCATTGGGCAGAGTAGATTCATTGGGGACTGATCCTGAAGGGAAACTTCCTGAGGAATCTCTCGGTGCTTCTGGTTTGAAGAAATGCTTCCGGAGAATGGGCTTTTCAACACAAGAACTTGTAGCTTTGTCCGGAGCTCACACCCTTGGAAGTAAAGGTTTCGGGAGCCCGACTACCTTTGACAATTCATATTATAAGGTTCTTTTGGAGAAGCCATGGACATCTGCAGGTGGCAGTATGATTGGCCTTCCTTCAGATCATGCACTTGTTGAGGATGATGAATGCATTAGATGGATTAAAAAATATGCAGACAATGAGAACATGTTCTTTGAAGATTTCAAGAATGCTTATCTCAAGCTGGTGAACTCTGGTGTGGATGGAATGGCTTATAAATTCCTGCTAGTGTTTATGCACAGTTGCCATGAAGTTTTTGGGATGTATTAA 978 0.4223 MSSSLSNHLLLSLQRPSTSTVNPNDHTVACSDIGPIAVIPSSKRRELICSLATLPCLLPLTRVLDCLPANAIPLDRKEYVLIKQELRKVLSKAKAAGVLRLVFHDAGTFQLDDNTGGMNGSIIYELERSENAGLKKSVKVLQKAKTEIDVIQQVSWADMIAVAGAEAVELCGGPPIQVSLGRVDSLGTDPEGKLPEESLGASGLKKCFRRMGFSTQELVALSGAHTLGSKGFGSPTTFDNSYYKVLLEKPWTSAGGSMIGLPSDHALVEDDECIRWIKKYADNENMFFEDFKNAYLKLVNSGVDGMAYKFLLVFMHSCHEVFGMY* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1077 325 Gene3D - 83 302 - -
Lan3g1077 325 Pfam Peroxidase 84 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 41 303 - -
Lan3g1077 325 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 41 303 IPR044831 GO:0004601|GO:0034599
Lan3g1077 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 217 227 IPR019793 -
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 95 110 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 113 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 153 171 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 172 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 193 210 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 211 232 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 PRINTS Plant ascorbate peroxidase signature 279 303 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 Gene3D Peroxidase, domain 2 195 295 - -
Lan3g1077 325 ProSitePatterns Peroxidases active site signature. 95 106 IPR019794 GO:0004601
Lan3g1077 325 SUPERFAMILY Heme-dependent peroxidases 92 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan3g1077 325 ProSiteProfiles Plant heme peroxidase family profile. 95 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1077 Lan-Chr3 23087102 23090943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1077 95 298 Peroxidase AT4G16270 30.534 3.89e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1077 K00434 - gmx:100792735 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1077 3 23087102 23090943 Lan3g1077 3 23087102 23090943 ECH