Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1061 ATGGTGAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCCATTGATGGGGATCCTTTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCCAAGACCGCAGAAAACTTTCGTGCACTATGTACAGGAGAAAAAGGAGTCAGTCCAAATACTGGAAAGCCACTGCACTACAAGGGGTCTTTCTTCCATCACATTTTAAAAGGTTCCTTTGTGCAGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGCTCAAATTTCCCAGATGAGTCATATAGGCTAAAGCACGATGCTCCAGGCATTCTATCAATGGCAATTGCTGACCGTGATACTCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTGGTGTTTGGGAAGCTTGTGCTAGGGCATAATATATTGAAGAAAATTGAAGACGTGGGTGATGAAGAAGGGCGTCCAACTGTAACTGTTAAAATCGTTAATTGTGGTGAATATGCTGAAGTACGGCTGAAGGGAAAGCACAAGAAATCTTCAAAAGACAGAAGGAAAAGAAGAAGATATTACTCATCTGAATCGGAGAGTTCTTCAGATTCAGACACAGAGTCTTCGGAAACTGATAGTGATTCTGAGTCAGATGTGTCCTCATCCTCTGACTTAAGTTCTTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAGAAAAGATAAATATAGACATGGAAAAAGAAGGGATAAACGCCATGATAAGAGACGGAGGAGGCGGGATAAGAGATCAAAGCGTAGATTGAGAAGGGAACCGGGCAGTGATTCTGATAGTGTGAGTAACAGGAACATTAACTCTGATGGTGATAGTCTTGATGCTCAAGGGAAAGAGCAAAAGTCTAAAGACCATTCTCATAAAAATGCTGAAGTCCGGTCTCCCTTAGTTGTGGAGAGACACAATCATAACAATGATGGGGTAGTGGATATGCTAGAGAACGCGGAACTTCCTAAGGAAAATGGAAATCAGATTACTAATGGCATTGGAGCTGACTACAGATCTGACCGAAGTAAAGAGAGGCAGCCTGATGTGATGGATGATCATTCGGGAAAATCGAGGAGCCGAAGCATGAGTCCTAAGCAACCCGTGAGTAAGAGTATGAGTGTCAGTCCCCGGAGGAGTCCGAGCAAAAGCCCAAGTGTTACTCCAAAAAAGAGATCTAGCAGAGGTCCAACTGGTAGTAGAAGCCCTCCTCCATCAAGGAAGAATGTGAGTAGAAGTCCGATTAGAAGCATTGGCAGAAGTCTAAGCAAAAGCATAAGTAGAAGCCCAGTAAGGGGCAGGATGGGAATAAGTGTGAGTAGGAGCCCAGCAAGGGGTGGGAAGGGGAGAAGTGTTAGTAGAAGCCCAGTAAGGGGTGGGAAGGGGAGAAGTGTTAGTAGAAGCCCTGTGAGGAGTAGGAAGAGTAGAAGTGTCAGTAGAAGCCCCGTGAGAAGTAGGAAGGGGAGAAGTGAGAGTAGAAGCCCTGTGAGGAGCAGGAAGGGAAGAAGTGTGAGTAGAAGCCCTGTGAGGAGTAGGAAGGGAATAAGTGTGAGTAGAAGCCCTGTGAGGAGTAGGAAAGGGAGAAGTGTCAGTAGAAGCCCTGTGAGAACTCGCTCTCATAGAAGTGTCAGCAAGAGCCCTGTAAGAAGTAGGAGACCTGTGAGGAGTAGGAAGGGTAGAAGTGTGAGTAGAAGCCCTGTAAGATCCCTCGATCGAGTTCGCAGGAGTCCTCCCAGAGCATCCCCACGAAAAACAATCAGCAGAAGTCCAGTTAGAGTATCAAGAAAGAGTGTTAGCAGGAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCTTCGAGGAGAGACATTAGTCGCAGTCCTGTCAGAGCACCAAGCCGAAGCAATCGCCGCAGTTACTCTAGGAGTCTTAGTCCTGTTCGCAGGACAAGGACACCTTGTCGGACGAGTTTGTCGAGGAGTGTTTCACCTGCTTCTTCGCCAAAGCGTGTCAGAAGGGGAAGAGGTTTTAGTGAACGATACTCTTATGCACGGAGGTACAATACCCCCTCACGGTCTCCGGTGAGGTCATACCACTACAATGGAAGAGATCGTGAGAGATATTCTAGTTACAGAAGGTATTCCCCTAGGCGTTACAGGAGCCCGCCACCACGTGGAAGAACTCCTCCAAGGTTCCGAAGCAGGAGGACACCATCTGTTTCCCCCAGCCCACCTTACCGTGCTCGACGATATAGCCGAAGCCGTAGCCTGGTCCGCAGTCGTTCCCCAGTTGAGCCACAACGATCTCACTCCTCTCCTCGTGTGGAGAGGCGATTGTCTCGGAGCAGGAGTCCATCCAAGTACAGGTCTTCCGAATCACGATCTCCGCGAAAAGCAAGCAGAGACAACAGGTCAGGGTCATCGTCCAGAAGTCCAGATGGAAAGAAAGGCTTGGTCTCTTATGGAGATGGTTCTCCCTGCTCGGGCGAAAGGTGA 2547 0.4751 MVKKKNPLVFMDVSIDGDPFERMVFELFYDVAPKTAENFRALCTGEKGVSPNTGKPLHYKGSFFHHILKGSFVQGGDFVNRNGTGGESIYGSNFPDESYRLKHDAPGILSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVLGHNILKKIEDVGDEEGRPTVTVKIVNCGEYAEVRLKGKHKKSSKDRRKRRRYYSSESESSSDSDTESSETDSDSESDVSSSSDLSSSSDDRRRKRKRSRKDKYRHGKRRDKRHDKRRRRRDKRSKRRLRREPGSDSDSVSNRNINSDGDSLDAQGKEQKSKDHSHKNAEVRSPLVVERHNHNNDGVVDMLENAELPKENGNQITNGIGADYRSDRSKERQPDVMDDHSGKSRSRSMSPKQPVSKSMSVSPRRSPSKSPSVTPKKRSSRGPTGSRSPPPSRKNVSRSPIRSIGRSLSKSISRSPVRGRMGISVSRSPARGGKGRSVSRSPVRGGKGRSVSRSPVRSRKSRSVSRSPVRSRKGRSESRSPVRSRKGRSVSRSPVRSRKGISVSRSPVRSRKGRSVSRSPVRTRSHRSVSKSPVRSRRPVRSRKGRSVSRSPVRSLDRVRRSPPRASPRKTISRSPVRVSRKSVSRSPVRSPARSLSRSSGRVPSRRDISRSPVRAPSRSNRRSYSRSLSPVRRTRTPCRTSLSRSVSPASSPKRVRRGRGFSERYSYARRYNTPSRSPVRSYHYNGRDRERYSSYRRYSPRRYRSPPPRGRTPPRFRSRRTPSVSPSPPYRARRYSRSRSLVRSRSPVEPQRSHSSPRVERRLSRSRSPSKYRSSESRSPRKASRDNRSGSSSRSPDGKKGLVSYGDGSPCSGER* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1061 848 MobiDBLite consensus disorder prediction 282 296 - -
Lan3g1061 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 MobiDBLite consensus disorder prediction 297 330 - -
Lan3g1061 848 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 176 306 - -
Lan3g1061 848 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 176 - -
Lan3g1061 848 Gene3D - 1 175 IPR029000 -
Lan3g1061 848 MobiDBLite consensus disorder prediction 356 378 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 502 516 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 543 580 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 237 272 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 485 501 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 646 683 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 527 542 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 787 821 - -
Lan3g1061 848 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 176 306 - -
Lan3g1061 848 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 176 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 582 596 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 379 446 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 715 730 - -
Lan3g1061 848 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Lan3g1061 848 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lan3g1061 848 MobiDBLite consensus disorder prediction 180 848 - -
Lan3g1061 848 MobiDBLite consensus disorder prediction 605 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1061 Lan-Chr3 22918413 22925088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1061 26 170 U-box Gene Family AT5G67530 40.136 3.95e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1061 K09566 - gmx:100800303 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g1061 3 22918413 22925088 Lan3g1061 3 22918413 22925088 ECH