Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1057 ATGGGATTTGGAAAACCATTCAAGGGAATAGTTCAGGATTTCAAAGGAAGAGCTGCATGCTATAAACAAGATTGGGCTTGTGCAGTTTCTGGTGTCAGCATATTAGCACCTACATTCTACATATTCTTTGCTTCTGCTCTTCCGGTTATCGCTTTCGGAGAGCAACTTAGTAGGGATACAGATGGAAGCTTGAGTACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAATTATACACTCAATAGTTGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCCGAACCCACGGTTATAATGTACACTTACCTGTACAGTTTCAGCAAGAATACCCCTGGACTTGGTCCCAAGATGTTTTTGCCTTGGGCTGGTTGGGTTTGTATTTGGACATCGCTCTTTTTGATACTGCTTGCAATTTTTAACGCATGCAATGTTATCACTAGGTTTACTAGAATTGCAGAGGAGTTATTTGGCATGCTTATTACTGTTTTGTTTTTTCAAGAGGCTATAAAGGGAGTGATACATGAGTTCAAGACACCCAAGTCTGAAAATCCTTTGTTGGAGGAATTTCAGTTTCAATGGCGGTATGCAAATGGATTACTTGCAATCATTTTCTCTATAGGATTAATTGGCGCTTCCCTTAAAAGCAGAAGAGCAAGAACATGGCGATATGGAACAGGGTGGCTACGAGGTTTTATCGCAGATTACGGGTGTCCAATGATGGTAGTGTTTTGGACTGCACTATCTTATGGTAAACCAGGCCAAGTTCCACATGGTGTTCCTAGAAGACTGTTTTGTCCACTTCCCTGGGAACCTGCTTCTCTCTACCATTGGACTGTAGTGAAGGATATGGGAAAGGTACCCGTGATTTATATATTGGCCGCAATTCTTCCAGCATTGATGATAGCAGGTTTATACTTTTTTGATCATAGTGTTGCTTCGAAGATGGCTCAACAAAAGGAATTTAACCTTCAAAAGCCTTCTGCTTACCACTATGATATGTTACTGCTTGGAATAATGACTCTAATTTGTGGGGTCCTTGGCCTTCCTCCATCAAATGGAGTTCTTCCACAGTCTCCTATGCATACAAAGAGTTTAGCTGTTCTTCGGAGCCAGATGATTCGAAAGAAGGTCGTAGAAAGCACCAAGGAATGCATTAAGCAACAAAGGACCAAATCTGAAATGTATGGAAAGATAGAAGCTGTGTTTTTAGAAATGAATACAGACCCTACAGATAAAGAGTTGCAAGCTTTGAAGAAAGCTGTAATGGAATCTGGTAACAAGGATGGTGAAAAGGAAAATTTTGATCCTGAGAAGAACATAGAGGAATATCTACCAGTCCGGGTTAATGAGCAAAGAGTGAGCAACTTATTGCAGTCCCTCATGATTGGCGTAGCAATTTTAGGAATCTCGGTTATTAAAATGATACCTACTTCAGTCCTATGGGGATATTTTGCATACATGGCAATTGATAGTCTCCCAGGGAATCAATTCTTCGAAAGGATATTGCTTCTCTTCATCACCCCAAGTCGGCGTTACAAACTTTTGGAAGGTTCTCATGCTTCATTTGTGGAGATAGTGCCATTCAAGACCATAGCTGCATTTACAGGCTTACAATTAGCATATTTCCTGTTTTGTTTTGGAGTGACACATATACCTATAGGTGGAATCTTGTTTCCACTACCATTCTTCCTTCTCATAGTTCTTAGAGAAAACTTGCTCCCAAAACTATTCAACTCTAGGCATCTTCAAGAACTAGATGCTGCCGAGTACGAGGAAATTGTTGGCGCTCCAGATGCTGCCCTTAATATGAAAAAAAGTTTAAAGCTAAAGGAGAAAGAGCCACTTGTTGGTGACACTGATGATAACGCAGAAGATGATTACTTTGATGCAGAAAAATTAGATGAGATGACGACAAGCAGGGGAGAGTTGAAACTTAAAAGCTTCAACGATAGAAACCGCGCGCGTAGCCTTAAGAGCTTCCGTGATGACAAAAACTTACAGGGTAAGTTGGAGAAGAAGAAGAAGTTGGAGGAATTGCAGAATGCATTTGCAGAACTAAGGCTTAGAAAAAATGAAATGGAAGTAAAAGCAATGAAGGAAAATATGGAGCTGAAAGGAACCATTGAGAACCTTGGAGCTATAAATGGGTTATTGGAGGATGGAATAAGAGCATTTGAAGAGAAATATACAAATTTGAGTTTACGTGTTGCTAGATTGGAACAAGAACGTATGGAACTTTTAAGGAGGGTAGCAACTATTGATGATGATGCTACATGA 2280 0.4026 MGFGKPFKGIVQDFKGRAACYKQDWACAVSGVSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIVGGQPLLILGVAEPTVIMYTYLYSFSKNTPGLGPKMFLPWAGWVCIWTSLFLILLAIFNACNVITRFTRIAEELFGMLITVLFFQEAIKGVIHEFKTPKSENPLLEEFQFQWRYANGLLAIIFSIGLIGASLKSRRARTWRYGTGWLRGFIADYGCPMMVVFWTALSYGKPGQVPHGVPRRLFCPLPWEPASLYHWTVVKDMGKVPVIYILAAILPALMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDMLLLGIMTLICGVLGLPPSNGVLPQSPMHTKSLAVLRSQMIRKKVVESTKECIKQQRTKSEMYGKIEAVFLEMNTDPTDKELQALKKAVMESGNKDGEKENFDPEKNIEEYLPVRVNEQRVSNLLQSLMIGVAILGISVIKMIPTSVLWGYFAYMAIDSLPGNQFFERILLLFITPSRRYKLLEGSHASFVEIVPFKTIAAFTGLQLAYFLFCFGVTHIPIGGILFPLPFFLLIVLRENLLPKLFNSRHLQELDAAEYEEIVGAPDAALNMKKSLKLKEKEPLVGDTDDNAEDDYFDAEKLDEMTTSRGELKLKSFNDRNRARSLKSFRDDKNLQGKLEKKKKLEELQNAFAELRLRKNEMEVKAMKENMELKGTIENLGAINGLLEDGIRAFEEKYTNLSLRVARLEQERMELLRRVATIDDDAT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1057 759 PANTHER BORON TRANSPORTER-LIKE PROTEIN 4 666 - -
Lan3g1057 759 Coils Coil 670 702 - -
Lan3g1057 759 Pfam HCO3- transporter family 193 373 IPR011531 GO:0006820|GO:0016021
Lan3g1057 759 Pfam HCO3- transporter family 6 180 IPR011531 GO:0006820|GO:0016021
Lan3g1057 759 Pfam HCO3- transporter family 447 537 IPR011531 GO:0006820|GO:0016021
Lan3g1057 759 Gene3D Helical hairpin bin 17 58 - -
Lan3g1057 759 Coils Coil 723 757 - -
Lan3g1057 759 PANTHER ANION EXCHANGE PROTEIN 4 666 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1057 Lan-Chr3 22867604 22873977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g1057 2 654 Antiporters AT4G32510 64.706 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1057 K24194 - gmx:100787412 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0797 14 14842711 14848151 Lan3g1057 3 22867604 22873977 LSH
Lan3g1057 3 22867604 22873977 Lan14g0797 14 14842711 14848151 PCT
Lan3g1057 3 22867604 22873977 Lan3g1057 3 22867604 22873977 PCT
Lan14g0797 14 14842711 14848151 Lan3g1057 3 22867604 22873977 PCT